RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ADCY7P51828 1080 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 C16orf62Q7Z3J2 963 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MMADHCQ9H3L0 296 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 DDX18Q9NVP1 670 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 NAIPQ13075 1403 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ERBB4Q15303 1308 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 O00370 1275 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CDH16O75309 829 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 KCNJ6P48051 423 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 NR1D2Q14995 579 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PTGISQ16647 500 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SHROOM1Q2M3G4 852 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZNF284Q2VY69 593 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SLFN12LQ6IEE8 588 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZFP1Q6P2D0 407 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 RRM2BQ7LG56 351 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 BLZF1Q9H2G9 400 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 CEP72Q9P209 647 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZNFX1Q9P2E3 1918 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 ALPK2Q86TB3 2170 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 GAPVD1Q14C86 1478 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 WDR64B1ANS9 1081 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SNAP23O00161 211 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ECDO95905 644 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 KRT19P08727 400 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 S100A2P29034 98 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CACNA2D1P54289 1103 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 LRRC74BQ6ZQY2 392 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 HACE1Q8IYU2 909 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 FAM162AQ96A26 154 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PRAM1Q96QH2 718 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 USP44Q9H0E7 712 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MYLK2Q9H1R3 596 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ANKRD36CQ5JPF3 1778 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZNF233A6NK53 670 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MYO1DO94832 1006 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 HSMCR30P0CW71 290 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 IL15P40933 162 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 EIF2S3LQ2VIR3 472 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 PM20D2Q8IYS1 436 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 RRN3Q9NYV6 651 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 CALB2P22676 271 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 GALNT17Q6IS24 598 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 SYDE1Q6ZW31 735 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 BBS5Q8N3I7 341 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PPM1KQ8N3J5 372 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 RIBC1Q8N443 379 aaPredicted RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 CDC26Q8NHZ8 85 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 AP3S1Q92572 193 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 FAF2Q96CS3 445 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 TUBGCP4Q9UGJ1 667 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PLXNB1O43157 2135 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CACNA1EQ15878 2313 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ASS1P00966 412 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 ZBED6P86452 979 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ERICH1Q86X53 443 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 TOR1AIP2Q8NFQ8 470 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 CLHC1Q8NHS4 586 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 PPP2R3CQ969Q6 453 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MAGEB5Q9BZ81 275 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 DDX56Q9NY93 547 aaKnown RBP6.48□□□□□ -1.37
VCAN-203ENST00000343200 PIK3C2GO75747 1445 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 RIMS2Q9UQ26 1411 aa6.48□□□□□ -1.37
VCAN-203ENST00000343200 MED23Q9ULK4 1368 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 ARHGEF37A1IGU5 675 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 MFAP3LO75121 409 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 APOL3O95236 402 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 CASP4P49662 377 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TAF2Q6P1X5 1199 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 SCUBE1Q8IWY4 988 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 KIF2BQ8N4N8 673 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 DPP10Q8N608 796 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 LARP4BQ92615 738 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 RBM41Q96IZ5 413 aaKnown RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 PRRG3Q9BZD7 231 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 SEMA3EO15041 775 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 CYP7A1P22680 504 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 NFKBIAP25963 317 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TMOD1P28289 359 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 FLT3P36888 993 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 ATP12AP54707 1039 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 TRIP13Q15645 432 aaPredicted RBP6.47□□□□□ -1.37
VCAN-203ENST00000343200 TYSND1Q2T9J0 566 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 NEK5Q6P3R8 708 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 RIN3Q8TB24 985 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 KLHL3Q9UH77 587 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 C2CD2Q9Y426 696 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 PALMO75781 387 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 BRAFP15056 766 aa6.47□□□□□ -1.37
VCAN-203ENST00000343200 VSNL1P62760 191 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms