RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 NXPE4Q6UWF7 544 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 SLC24A5Q71RS6 500 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 KCNK18Q7Z418 384 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 RNF149Q8NC42 400 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ADAM2Q99965 735 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 SLC4A5Q9BY07 1137 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 CCDC113Q9H0I3 377 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 BHMT2Q9H2M3 363 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ELAC1Q9H777 363 aaKnown RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 CHST12Q9NRB3 414 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 KLK14Q9P0G3 267 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ATP8A1Q9Y2Q0 1164 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 SRPRBQ9Y5M8 271 aaKnown RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 ADGRA3Q8IWK6 1321 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 DENND3A2RUS2 1198 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 E9PMD0 336 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 DGKIO75912 1065 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 STAG3L1P0CL83 205 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PHKA2P46019 1235 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PKP1Q13835 747 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 TFDP1Q14186 410 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 SLC39A14Q15043 492 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 CDCA2Q69YH5 1023 aaPredicted RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 FAM117BQ6P1L5 589 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 CDX2Q99626 313 aaPredicted RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 TRIM56Q9BRZ2 755 aaKnown RBP11.33□□□□□ -0.6
TPM3-207ENST00000341372 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 MINDY3Q9H8M7 445 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 AGPAT5Q9NUQ2 364 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 DNM3Q9UQ16 869 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 PCDHB3Q9Y5E6 796 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 TRANK1O15050 2925 aa11.33□□□□□ -0.6
TPM3-207ENST00000341372 CCDC189A1A4V9 331 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 LINC00271P0C7V0 271 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 FGFR4P22455 802 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 ERVK-21P61565 698 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 CABP7Q86V35 215 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 SPSB2Q99619 263 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 TMEM161AQ9NX61 479 aa11.32□□□□□ -0.6
TPM3-207ENST00000341372 R3HCC1Q9Y3T6 440 aaKnown RBP11.32□□□□□ -0.6
TPM3-207ENST00000341372 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 UPP2O95045 317 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 YEATS4O95619 227 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 SLC12A3P55017 1021 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 MBTD1Q05BQ5 628 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 LINC00301Q8NCQ3 95 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 SAMD11Q96NU1 681 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 CSRNP2Q9H175 543 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 A0A0U1RQF3 1178 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 A6NJY4 79 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 ATF7P17544 494 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 GUCY2CP25092 1073 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 MARCKSP29966 332 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 EIF4A3P38919 411 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 UBA7P41226 1012 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 NAMPTP43490 491 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 RINT1Q6NUQ1 792 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 CATSPER4Q7RTX7 472 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 SPRED2Q7Z698 418 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 ZNF598Q86UK7 904 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 DAW1Q8N136 415 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 BSNDQ8WZ55 320 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 KIFAP3Q92845 792 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 TGS1Q96RS0 853 aaKnown RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 KCTD15Q96SI1 283 aaPredicted RBP11.31□□□□□ -0.6
TPM3-207ENST00000341372 RSRP1Q9BUV0 290 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 MYH11P35749 1972 aa11.31□□□□□ -0.6
TPM3-207ENST00000341372 EPOPA6NHQ4 379 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 PPP6R2O75170 966 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 AXLP30530 894 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 HOXA11P31270 313 aaPredicted RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 MAPK7Q13164 816 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 NFE2Q16621 373 aaPredicted RBP11.3□□□□□ -0.6
TPM3-207ENST00000341372 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
TPM3-207ENST00000341372 FAM102BQ5T8I3 360 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms