RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 C15orf41Q9Y2V0 281 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 IGSF9BQ9UPX0 1349 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SGPL1O95470 568 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 TTC4O95801 387 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 TNNI1P19237 187 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 PHBP35232 272 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SLC1A1P43005 524 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MSH2P43246 934 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 NFIAQ12857 509 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 RIPK1Q13546 671 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 NFIL3Q16649 462 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 WLSQ5T9L3 541 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 DCUN1D2Q6PH85 259 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 VPS52Q8N1B4 723 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SPDL1Q96EA4 605 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MBOAT7Q96N66 472 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 TTC25Q96NG3 672 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 CSRNP1Q96S65 589 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 PDGFDQ9GZP0 370 aaPredicted RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 VCXQ9H320 206 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SAYSD1Q9NPB0 183 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SPATS2LQ9NUQ6 558 aaKnown RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 FRMPD4Q14CM0 1322 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 FAM47DPA6NHR8 397 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MARCKSL1P49006 195 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 CAPRIN2Q6IMN6 1127 aaKnown RBP10.05□□□□□ -0.8
TRERF1-201ENST00000340840 RTKN2Q8IZC4 609 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 FBXL13Q8NEE6 735 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 C9orf72Q96LT7 481 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 FOXP3Q9BZS1 431 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 PCDHA3Q9Y5H8 950 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 ITGB4P16144 1822 aa10.05□□□□□ -0.8
TRERF1-201ENST00000340840 SLIT2O94813 1529 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 DKC1O60832 514 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SLITRK3O94933 977 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SCP2P22307 547 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 KAZNQ674X7 775 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 MFSD5Q6N075 450 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CCDC62Q6P9F0 684 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ZNF449Q6P9G9 518 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 PHLDB2Q86SQ0 1253 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SULF1Q8IWU6 871 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 AGGF1Q8N302 714 aaeCLIP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ZNF317Q96PQ6 595 aaPredicted RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SENP1Q9P0U3 644 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 L3MBTL1Q9Y468 752 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 HNRNPDLO14979 420 aaKnown RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SLC16A4O15374 487 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 MYBL1P10243 752 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ALDH5A1P51649 535 aaPredicted RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 C9orf131Q5VYM1 1079 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 EXOC3L1Q86VI1 746 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 RIBC1Q8N443 379 aaPredicted RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ART4Q93070 314 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 GMCL1Q96IK5 515 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 AGTPBP1Q9UPW5 1226 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 A0A1B0GUL6 1792 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 LRRD1A4D1F6 860 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 MYCLP12524 364 aaPredicted RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 NOVP48745 357 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CDR2Q01850 454 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 PPP1R2P3Q6NXS1 205 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ZDHHC24Q6UX98 284 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SLC9A9Q8IVB4 645 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 RHOT1Q8IXI2 618 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 KCNV2Q8TDN2 545 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 MKL1Q969V6 931 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SAAL1Q96ER3 474 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 MAGEB18Q96M61 343 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 DDX23Q9BUQ8 820 aaKnown RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 DNAJC18Q9H819 358 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CCDC88AQ3V6T2 1871 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CYP3A4P08684 503 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 GYS1P13807 737 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 QARSP47897 775 aaKnown RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CC2D2BQ6DHV5 1058 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 TEX2Q8IWB9 1127 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 ERP27Q96DN0 273 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 GRHL1Q9NZI5 618 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 CCPG1Q9ULG6 757 aa10.04□□□□□ -0.8
TRERF1-201ENST00000340840 SNRPFP62306 86 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 SARNPP82979 210 aaKnown RBP10.03□□□□□ -0.8
TRERF1-201ENST00000340840 CENPCQ03188 943 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms