RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 COPB2P35606 906 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 SREBF1P36956 1147 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 ATP11CQ8NB49 1132 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 GPRC5CQ9NQ84 441 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 TYW5A2RUC4 315 aaKnown RBP20.49■□□□□ 0.87
CDK13-202ENST00000340829 CSPG5O95196 566 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 IL1R1P14778 569 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 TAL1P17542 331 aaPredicted RBP20.49■□□□□ 0.87
CDK13-202ENST00000340829 TAP1Q03518 808 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 SYCP2LQ5T4T6 812 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 TRIM65Q6PJ69 517 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 JAMLQ86YT9 394 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 SCN4BQ8IWT1 228 aa20.49■□□□□ 0.87
CDK13-202ENST00000340829 BAZ2BQ9UIF8 2168 aaKnown RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 CYP2C19P33261 490 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 SARSP49591 514 aaKnown RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 KPNA2P52292 529 aaKnown RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 NME3Q13232 169 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 KCTD17Q8N5Z5 321 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDK13-202ENST00000340829 ATP6V1E2Q96A05 226 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 MCEEQ96PE7 176 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 HERVK_113P62684 666 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 LRGUKQ96M69 825 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 ACAP3Q96P50 834 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 ZIM3Q96PE6 472 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 SENP7Q9BQF6 1050 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 VPS11Q9H270 941 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 ABT1Q9ULW3 272 aaKnown RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 STAP1Q9ULZ2 295 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 MDH1P40925 334 aaKnown RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 KCNJ1P48048 391 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 Q9H521 79 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 HSPA4LO95757 839 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 ICAM1P05362 532 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 MXD4Q14582 209 aaPredicted RBP20.48■□□□□ 0.87
CDK13-202ENST00000340829 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 PACSIN1Q9BY11 444 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 THAP2Q9H0W7 228 aa20.48■□□□□ 0.87
CDK13-202ENST00000340829 CCDC195A0A1B0GUA6 201 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 CFLARO15519 480 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 KITP10721 976 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 CAP2P40123 477 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 C9orf72Q96LT7 481 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 PCDHB2Q9Y5E7 798 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 IGSF9BQ9UPX0 1349 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 EIF3EP60228 445 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 P3H1Q32P28 736 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 MOXD1Q6UVY6 613 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 FASTKD5Q7L8L6 764 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 LRRC71Q8N4P6 559 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 SCFD1Q8WVM8 642 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 TARS2Q9BW92 718 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 GOLGA8CPA6NN73 597 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 NOP14P78316 857 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 BYSLQ13895 437 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 MID2Q9UJV3 735 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 LCP1P13796 627 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 RGS7P49802 495 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 AP1B1Q10567 949 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 TAF11Q15544 211 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 HIF1AQ16665 826 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 TKFCQ3LXA3 575 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 WDR75Q8IWA0 830 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 TTC39CQ8N584 583 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 TPCN2Q8NHX9 752 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 TRAIPQ9BWF2 469 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 ANKEF1Q9NU02 776 aa20.47■□□□□ 0.87
CDK13-202ENST00000340829 CPSF2Q9P2I0 782 aaKnown RBP20.47■□□□□ 0.87
CDK13-202ENST00000340829 S100BP04271 92 aaPredicted RBP20.46■□□□□ 0.87
CDK13-202ENST00000340829 LONRF1Q17RB8 773 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 TBX20Q9UMR3 447 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 GOLGA8QA0A0J9YX86 632 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 GOLGA8OA6NCC3 632 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 GOLGA8NF8WBI6 632 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 FOXN3O00409 490 aaPredicted RBP20.46■□□□□ 0.87
CDK13-202ENST00000340829 MUM1L1Q5H9M0 696 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 TEX2Q8IWB9 1127 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 KIAA0895Q8NCT3 520 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 ANGPTL3Q9Y5C1 460 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 H0Y3Z8 333 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 RCOR2Q8IZ40 523 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 EXT2Q93063 718 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 SLC13A1Q9BZW2 595 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 SNX9Q9Y5X1 595 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 P4HA2O15460 535 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 SHMT1P34896 483 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 TSTA3Q13630 321 aaPredicted RBP20.46■□□□□ 0.87
CDK13-202ENST00000340829 SGSM1Q2NKQ1 1148 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 FIGNQ5HY92 759 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 NT5DC1Q5TFE4 455 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 PPWD1Q96BP3 646 aaKnown RBP20.46■□□□□ 0.87
CDK13-202ENST00000340829 ZFP69BQ9UJL9 534 aa20.46■□□□□ 0.87
CDK13-202ENST00000340829 PEX19P40855 299 aa20.45■□□□□ 0.86
CDK13-202ENST00000340829 TAF1BQ53T94 588 aaPredicted RBP20.45■□□□□ 0.86
CDK13-202ENST00000340829 THEM5Q8N1Q8 247 aa20.45■□□□□ 0.86
CDK13-202ENST00000340829 FBXO41Q8TF61 875 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms