RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 ADSLP30566 484 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 NRLP54845 237 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CSE1LP55060 971 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MYL6P60660 151 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CCT2P78371 535 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 LRRC63Q05C16 580 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 IRF5Q13568 498 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CEP55Q53EZ4 464 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FOXR2Q6PJQ5 311 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FKBP9P1Q75LS8 142 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KRT74Q7RTS7 529 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ZBTB38Q8NAP3 1195 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 B3GALNT2Q8NCR0 500 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CLMNQ96JQ2 1002 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FAM167AQ96KS9 214 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ALG1Q9BT22 464 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 C1QTNF7Q9BXJ2 289 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 C1orf115Q9H7X2 142 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TMEM206Q9H813 350 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PSD3Q9NYI0 1048 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 EURLQ9NYK6 297 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 VPS18Q9P253 973 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CLASP2O75122 1294 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GJC1P36383 396 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ENPEPQ07075 957 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CYLC2Q14093 348 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KBTBD12Q3ZCT8 623 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 STRIP1Q5VSL9 837 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 E4F1Q66K89 784 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FAM92BQ6ZTR7 304 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DNAJB7Q7Z6W7 309 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 NEK8Q86SG6 692 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ULK2Q8IYT8 1036 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MYOCDQ8IZQ8 938 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PHF21AQ96BD5 680 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ARL8AQ96BM9 186 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PLEKHF1Q96S99 279 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CLEC4MQ9H2X3 399 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PDP2Q9P2J9 529 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TK2O00142 265 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 RRP8O43159 456 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PSMD3O43242 534 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MAGEC1O60732 1142 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MTRF1O75570 445 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 LDHAP00338 332 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CHGBP05060 677 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SLC12A1Q13621 1099 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CCDC85BQ15834 202 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GRAMD4Q6IC98 578 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TMC7Q7Z402 723 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TMC6Q7Z403 805 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ARL10Q8N8L6 244 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SPATA5Q8NB90 893 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CHST13Q8NET6 341 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DNAJC11Q9NVH1 559 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KCND2Q9NZV8 630 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 RSL24D1Q9UHA3 163 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ADAM30Q9UKF2 790 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 AGTPBP1Q9UPW5 1226 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MFHAS1Q9Y4C4 1052 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ARFGEF1Q9Y6D6 1849 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CARSP49589 748 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SERPINH1P50454 418 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 RWDD2BP57060 319 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 STARD3Q14849 445 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ATAT1Q5SQI0 421 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DAB2IPQ5VWQ8 1189 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MSL3Q8N5Y2 521 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 NEK9Q8TD19 979 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TGFBRAP1Q8WUH2 860 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 HDAC7Q8WUI4 952 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ACOT12Q8WYK0 555 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 INPP5DQ92835 1189 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 DHTKD1Q96HY7 919 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 MMS19Q96T76 1030 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 INTS2Q9H0H0 1204 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 PARVAQ9NVD7 372 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 USP16Q9Y5T5 823 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 COL3A1P02461 1466 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GRID2IPA4D2P6 1211 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TRIM27P14373 513 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 GMPSP49915 693 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 COPZ1P61923 177 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FKBP3Q00688 224 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 AP3B2Q13367 1082 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CTTNQ14247 550 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 FAM45BPQ6NSW5 357 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 SRBD1Q8N5C6 995 aaKnown RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 BLOC1S5Q8TDH9 187 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 THRSPQ92748 146 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 EZH1Q92800 747 aaPredicted RBP3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TSSK1BQ9BXA7 367 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 OSBPL10Q9BXB5 764 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 USP26Q9BXU7 913 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 BOLA2Q9H3K6 86 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 KANSL2Q9H9L4 492 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 TRPC7Q9HCX4 862 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 CYP26B1Q9NR63 512 aa3.47□□□□□ -1.85
CSMD3-202ENST00000339701 ATAD3AQ9NVI7 634 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms