RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 LYPLA2O95372 231 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 PMS2P54278 862 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 SLMAPQ14BN4 828 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 ZKSCAN8Q15776 578 aaPredicted RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 XKR9Q5GH70 373 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 DPY19L2Q6NUT2 758 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 BZW1Q7L1Q6 419 aaKnown RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 NLRX1Q86UT6 975 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 C4orf19Q8IY42 314 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 NSUN6Q8TEA1 469 aaKnown RBP20.13■□□□□ 0.81
PSPC1-201ENST00000338910 ERP44Q9BS26 406 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 SIX2Q9NPC8 291 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 INTUQ9ULD6 942 aa20.13■□□□□ 0.81
PSPC1-201ENST00000338910 KIF3CO14782 793 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 SORBS3O60504 671 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 TRIM49P0CI25 452 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 TRIM49CP0CI26 452 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 CCNHP51946 323 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-201ENST00000338910 JAK3P52333 1124 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 IFI35P80217 286 aaPredicted RBP20.12■□□□□ 0.81
PSPC1-201ENST00000338910 KRT76Q01546 638 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 SP4Q02446 784 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 PRMT1Q99873 361 aaKnown RBP20.12■□□□□ 0.81
PSPC1-201ENST00000338910 ACAD9Q9H845 621 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 ELP3Q9H9T3 547 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 NOP53Q9NZM5 478 aaKnown RBP20.12■□□□□ 0.81
PSPC1-201ENST00000338910 TRPC6Q9Y210 931 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 MYH11P35749 1972 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 IRF6O14896 467 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 PLS3P13797 630 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 NQO1P15559 274 aaKnown RBP20.12■□□□□ 0.81
PSPC1-201ENST00000338910 KCNJ2P63252 427 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 DR1Q01658 176 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 DENND2CQ68D51 928 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 CLMNQ96JQ2 1002 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 MKNK1Q9BUB5 465 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 AZI2Q9H6S1 392 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 TELO2Q9Y4R8 837 aa20.12■□□□□ 0.81
PSPC1-201ENST00000338910 RGS20O76081 388 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 SFNP31947 248 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 PEX3P56589 373 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 NCALDP61601 193 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 OTUD5Q96G74 571 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 WDR90Q96KV7 1748 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 ZNF570Q96NI8 536 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 AMFRQ9UKV5 643 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 TLDC2A0PJX2 215 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 RGS16O15492 202 aaPredicted RBP20.11■□□□□ 0.81
PSPC1-201ENST00000338910 UBOX5O94941 541 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 AGTP01019 485 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 VIMP08670 466 aaKnown RBP20.11■□□□□ 0.81
PSPC1-201ENST00000338910 RARAP10276 462 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 IREB2P48200 963 aaKnown RBP20.11■□□□□ 0.81
PSPC1-201ENST00000338910 FMO5P49326 533 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 C11orf91Q3C1V1 193 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 CBWD6Q4V339 395 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 CBWD3Q5JTY5 395 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 CBWD5Q5RIA9 395 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 FAM102BQ5T8I3 360 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 DCAF12L1Q5VU92 463 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 MOV10L1Q9BXT6 1211 aaKnown RBP20.11■□□□□ 0.81
PSPC1-201ENST00000338910 DAAM1Q9Y4D1 1078 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 PCDHA10Q9Y5I2 948 aa20.11■□□□□ 0.81
PSPC1-201ENST00000338910 TULP1O00294 542 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 DDX3XO00571 662 aaKnown RBP eCLIP20.1■□□□□ 0.819e-10■□□□□ 11.3
PSPC1-201ENST00000338910 SLC16A4O15374 487 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 XRRA1Q6P2D8 792 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 ZDHHC24Q6UX98 284 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 ANO5Q75V66 913 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 HAUS6Q7Z4H7 955 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 GPRASP2Q96D09 838 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 NSRP1Q9H0G5 558 aaKnown RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 OTOFQ9HC10 1997 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 PTPRFP10586 1907 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 MYPNQ86TC9 1320 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 GTPBP10A4D1E9 387 aaKnown RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 DDX3YO15523 660 aaKnown RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 SNX3O60493 162 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 OAS1P00973 400 aaKnown RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 ALDH5A1P51649 535 aaPredicted RBP20.1■□□□□ 0.81
PSPC1-201ENST00000338910 SLC29A2Q14542 456 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 PPP2R5EQ16537 467 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 GALNTL6Q49A17 601 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 CDCA5Q96FF9 252 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 GABBR1Q9UBS5 961 aa20.1■□□□□ 0.81
PSPC1-201ENST00000338910 FAM187AA6NFU0 413 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 EPHX2P34913 555 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 DRG2P55039 364 aaKnown RBP20.09■□□□□ 0.81
PSPC1-201ENST00000338910 JAM2P57087 298 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 C6orf118Q5T5N4 469 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 GADL1Q6ZQY3 521 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 VPS36Q86VN1 386 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 FBXO25Q8TCJ0 367 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 GLG1Q92896 1179 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 SPDL1Q96EA4 605 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 ACCSQ96QU6 501 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 CBWD1Q9BRT8 395 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 TMEM206Q9H813 350 aa20.09■□□□□ 0.81
PSPC1-201ENST00000338910 ERVK-5Q9HDB9 667 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms