RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 SIP14410 1827 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 A0A1W2PQ45 241 aaPredicted RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 A0A1W2PQY0 241 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 RSPH10B2B2RC85 870 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 DDX3YO15523 660 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 CEP104O60308 925 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 GAS7O60861 476 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 PPFIA2O75334 1257 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 NUDT17P0C025 328 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 FAM153BP0C7A2 387 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 RSPH10BP0C881 870 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 GZMAP12544 262 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 LSP1P33241 339 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 MDH1P40925 334 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 NOP2P46087 812 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 CASP4P49662 377 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 HSD17B4P51659 736 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 MYL7Q01449 175 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 TLE2Q04725 743 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 CETN1Q12798 172 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 FAM153CQ494X1 144 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 FOXR1Q6PIV2 292 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 FAM178BQ8IXR5 827 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 DEFB123Q8N688 67 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 LMO3Q8TAP4 145 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 CENPTQ96BT3 561 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 FAM81BQ96LP2 452 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 GDAP1L1Q96MZ0 367 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 PSMB7Q99436 277 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 TMEM109Q9BVC6 243 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 GPR88Q9GZN0 384 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 INTS2Q9H0H0 1204 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 ZHX3Q9H4I2 956 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 CNOT10Q9H9A5 744 aaKnown RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 PRDM5Q9NQX1 630 aaPredicted RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 HOMER2Q9NSB8 354 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
RTN3-201ENST00000338850 PARP2Q9UGN5 583 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 FAM153AQ9UHL3 310 aa11.61□□□□□ -0.55
RTN3-201ENST00000338850 C5orf60A6NFR6 353 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 KRIT1O00522 736 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 FAM107AO95990 144 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 MYZAPP0CAP1 466 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 ABCD1P33897 745 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 HSD17B3P37058 310 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 CDR1P51861 262 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 ACLYP53396 1101 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 CNTN2Q02246 1040 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 MAPK7Q13164 816 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 ACVR2BQ13705 512 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 DRAP1Q14919 205 aaPredicted RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 PTGISQ16647 500 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 TTC31Q49AM3 519 aaPredicted RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 TCERG1LQ5VWI1 586 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 CCSAPQ6IQ19 270 aaPredicted RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 TMC3Q7Z5M5 1100 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 MYCT1Q8N699 235 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 KLHDC9Q8NEP7 349 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 RDM1Q8NG50 284 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 BADQ92934 168 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 AGBL1Q96MI9 1066 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 TSEN34Q9BSV6 310 aaKnown RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 ACAD9Q9H845 621 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 MTMR10Q9NXD2 777 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 LARSQ9P2J5 1176 aaKnown RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 SLC12A6Q9UHW9 1150 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 RASAL2Q9UJF2 1139 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 DNAJC12Q9UKB3 198 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 AJAP1Q9UKB5 411 aaPredicted RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 PLAAQ9Y263 795 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 UTP11Q9Y3A2 253 aaKnown RBP11.6□□□□□ -0.55
RTN3-201ENST00000338850 FAM169AQ9Y6X4 670 aa11.6□□□□□ -0.55
RTN3-201ENST00000338850 MYADML2A6NDP7 307 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 ADCY6O43306 1168 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 DUSP11O75319 330 aaKnown RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 ERLIN2O94905 339 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 FSBPO95073 299 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 KRT13P13646 458 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 SCP2P22307 547 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 CST5P28325 142 aaPredicted RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 CHRNA3P32297 505 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 CCT5P48643 541 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 SNAP25P60880 206 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 ARID5AQ03989 594 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 UAP1Q16222 522 aaPredicted RBP11.59□□□□□ -0.55
RTN3-201ENST00000338850 CYP1B1Q16678 543 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 TKFCQ3LXA3 575 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 EPC2Q52LR7 807 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 ARMCX2Q7L311 632 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 DAAM2Q86T65 1068 aa11.59□□□□□ -0.55
RTN3-201ENST00000338850 HOOK3Q86VS8 718 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms