RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 OSTNP61366 133 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 TUSC3Q13454 348 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 CLUL1Q15846 466 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 XKR4Q5GH76 650 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 TMEM184AQ6ZMB5 413 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 SV2BQ7L1I2 683 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 PDILTQ8N807 584 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 PPP1R10Q96QC0 940 aaKnown RBP16.72■□□□□ 0.27
PRKN-201ENST00000338468 ZHX3Q9H4I2 956 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 MUTYHQ9UIF7 546 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 RCOR1Q9UKL0 485 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 PCDHA7Q9UN72 937 aa16.72■□□□□ 0.27
PRKN-201ENST00000338468 TRIOO75962 3097 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 TRIP11Q15643 1979 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 H0YCG3 227 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 K7ENM7 598 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 TBCAO75347 108 aaKnown RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 PIGRP01833 764 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 THP07101 528 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 IGFBP6P24592 240 aaPredicted RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 GTF2BQ00403 316 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 MCL1Q07820 350 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 COASYQ13057 564 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 SMAD4Q13485 552 aaKnown RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 ZC2HC1CQ53FD0 456 aaPredicted RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 HERC4Q5GLZ8 1057 aaPredicted RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 GLRA4Q5JXX5 417 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 SLC39A4Q6P5W5 647 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 APBB1IPQ7Z5R6 666 aaPredicted RBP16.71■□□□□ 0.27
PRKN-201ENST00000338468 SFR1Q86XK3 245 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 TCHPQ9BT92 498 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 CD207Q9UJ71 328 aa16.71■□□□□ 0.27
PRKN-201ENST00000338468 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
PRKN-201ENST00000338468 FRMD3A2A2Y4 597 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 MBTPS2O43462 519 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 PPP1R37O75864 691 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 SOD2P04179 222 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 HARSP12081 509 aaKnown RBP16.7■□□□□ 0.26
PRKN-201ENST00000338468 NOLC1Q14978 699 aaKnown RBP eCLIP16.7■□□□□ 0.26
PRKN-201ENST00000338468 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 ZNF720Q7Z2F6 126 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 MAP4K3Q8IVH8 894 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 SMRP1Q8NCR6 262 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 SNX27Q96L92 541 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
PRKN-201ENST00000338468 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
PRKN-201ENST00000338468 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 STRA6Q9BX79 667 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 ST6GALNAC4Q9H4F1 302 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 STK39Q9UEW8 545 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 HCFC2Q9Y5Z7 792 aa16.7■□□□□ 0.26
PRKN-201ENST00000338468 FSD2A1L4K1 749 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 CLDN3O15551 220 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 FAM189A1O60320 539 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 NR1I2O75469 434 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 KIF4AO95239 1232 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 SCP2P22307 547 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
PRKN-201ENST00000338468 HSP90AA2PQ14568 343 aaPredicted RBP16.69■□□□□ 0.26
PRKN-201ENST00000338468 SLC10A6Q3KNW5 377 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 KIAA0319Q5VV43 1072 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 RESP18Q5W5W9 173 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 LLGL2Q6P1M3 1020 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 FUT10Q6P4F1 479 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 SYCE2Q6PIF2 218 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 CD300LGQ6UXG3 332 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 RNF135Q8IUD6 432 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 SLC22A17Q8WUG5 538 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 STAMQ92783 540 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 B3GALT6Q96L58 329 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 ACAP3Q96P50 834 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 CHST7Q9NS84 486 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 KBTBD4Q9NVX7 518 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 ADAM28Q9UKQ2 775 aa16.69■□□□□ 0.26
PRKN-201ENST00000338468 TISP43B9A030 160 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 ANKRD63C9JTQ0 380 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 CNPP09543 421 aaKnown RBP16.68■□□□□ 0.26
PRKN-201ENST00000338468 KCNE1P15382 129 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 CA8P35219 290 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 ME1P48163 572 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 LIG4P49917 911 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 DSG1Q02413 1049 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 ZBTB41Q5SVQ8 909 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 ANKRD54Q6NXT1 300 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 HASPINQ8TF76 798 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 LEO1Q8WVC0 666 aaPredicted RBP16.68■□□□□ 0.26
PRKN-201ENST00000338468 DHX58Q96C10 678 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 BICD1Q96G01 975 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 KLHL5Q96PQ7 755 aa16.68■□□□□ 0.26
PRKN-201ENST00000338468 S1PR5Q9H228 398 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms