RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SMC3Q9UQE7 1217 aa14.7□□□□□ -0.06
NUDCD3-201ENST00000338427 TNFSF13BQ9Y275 285 aa14.7□□□□□ -0.06
NUDCD3-201ENST00000338427 SMIM28A0A1B0GU29 152 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 HARSP12081 509 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 EFNA5P52803 228 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 NTHL1P78549 312 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 TCF15Q12870 199 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 DHX8Q14562 1220 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 RILPL1Q5EBL4 403 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 ARSHQ5FYA8 562 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 SUGP1Q8IWZ8 645 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 SMG7Q92540 1137 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 TBC1D32Q96NH3 1257 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 TTPALQ9BTX7 342 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 RAB34Q9BZG1 259 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 TMEM134Q9H6X4 195 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 FNIP2Q9P278 1114 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 STK39Q9UEW8 545 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 USTQ9Y2C2 406 aa14.69□□□□□ -0.06
NUDCD3-201ENST00000338427 LAD1O00515 517 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 ABLIM1O14639 778 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 NARSO43776 548 aaKnown RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 PLA2G4BP0C869 781 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 GBP2P32456 591 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 SLC12A3P55017 1021 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 DCAF4L1Q3SXM0 396 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 ALKAL1Q6UXT8 129 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 CCDC149Q6ZUS6 474 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 SYT2Q8N9I0 419 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 C3orf58Q8NDZ4 430 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 CMASQ8NFW8 434 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 ACSF2Q96CM8 615 aaPredicted RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 TCHPQ9BT92 498 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 HAPLN2Q9GZV7 340 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 KCNK12Q9HB15 430 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 PIDD1Q9HB75 910 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 WDR6Q9NNW5 1121 aaKnown RBP14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 ARHGAP28Q9P2N2 729 aa14.68□□□□□ -0.06
NUDCD3-201ENST00000338427 ZDBF2Q9HCK1 2354 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 B3GAT3O94766 335 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 GRM5P41594 1212 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 SPAG1Q07617 926 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 MTMR3Q13615 1198 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 PSMD5Q16401 504 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 HYIQ5T013 277 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 C15orf39Q6ZRI6 1047 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 OTOP3Q7RTS5 596 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 C18orf25Q96B23 403 aaPredicted RBP14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 NTPCRQ9BSD7 190 aaKnown RBP14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 FAM86C1Q9NVL1 165 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 STK24Q9Y6E0 443 aa14.67□□□□□ -0.06
NUDCD3-201ENST00000338427 SF3B1O75533 1304 aaKnown RBP eCLIP14.66□□□□□ -0.062e-15■■■■■ 361.9
NUDCD3-201ENST00000338427 MTCL1Q9Y4B5 1905 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 CCL16O15467 120 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 PI15O43692 258 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 ZMYND10O75800 440 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 FGFR3P22607 806 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 PROZP22891 400 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 GUCY2CP25092 1073 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 TKTP29401 623 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 OR1D2P34982 312 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 MRE11P49959 708 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 DMP1Q13316 513 aaPredicted RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 UPP1Q16831 310 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 ZNF568Q3ZCX4 644 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 TMEM119Q4V9L6 283 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 XKR4Q5GH76 650 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 FAM173BQ6P4H8 233 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 GRASPQ7Z6J2 395 aaPredicted RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 UBALD2Q8IYN6 164 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 TMEM105Q8N8V8 129 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 TMEM161BQ8NDZ6 487 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 PIK3R5Q8WYR1 880 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 RPP25Q9BUL9 199 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 MRPL4Q9BYD3 311 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 PLEKHA4Q9H4M7 779 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 KIF3AQ9Y496 699 aa14.66□□□□□ -0.06
NUDCD3-201ENST00000338427 VWA8A3KMH1 1905 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 ZMYM2Q9UBW7 1377 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 H0Y858 1186 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 PLS3P13797 630 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 NPR3P17342 541 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 TDGQ13569 410 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 MCM6Q14566 821 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 SF3A1Q15459 793 aaKnown RBP14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 SLC10A6Q3KNW5 377 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 SPECC1Q5M775 1068 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 SLC44A3Q8N4M1 653 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 HDAC7Q8WUI4 952 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 DRC1Q96MC2 740 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 ACAP3Q96P50 834 aa14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 CCDC94Q9BW85 323 aaPredicted RBP14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 UPF2Q9HAU5 1272 aaKnown RBP14.65□□□□□ -0.06
NUDCD3-201ENST00000338427 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms