RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 KRT14P02533 472 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 INHBAP08476 426 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 PLA2G4AP47712 749 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CCHCR1Q8TD31 782 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 YDJCA8MPS7 323 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 OGTO15294 1046 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 HBP1O60381 514 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 COMTP21964 271 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 TMED2Q15363 201 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SGSM1Q2NKQ1 1148 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 DSTYKQ6XUX3 929 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 LRRC55Q6ZSA7 311 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 VSIG10LQ86VR7 867 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CELF4Q9BZC1 486 aaKnown RBP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 AKAP12Q02952 1782 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CCL15-CCL14A0A0B4J2E2 113 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 F8VZ95 297 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 LIG3P49916 1009 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 SNAPC2Q13487 334 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CCL15Q16663 113 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CD2APQ9Y5K6 639 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 MYH3P11055 1940 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 DLG5Q8TDM6 1919 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 EXOC1LA0A1B0GW35 172 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 TGFB1I1O43294 461 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 PGK2P07205 417 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CDR2Q01850 454 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 FOXR2Q6PJQ5 311 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CENPUQ71F23 418 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 DDX42Q86XP3 938 aaKnown RBP eCLIP6.7□□□□□ -1.34
PRKDC-202ENST00000338368 DNERQ8NFT8 737 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 IGKV6D-41A0A0C4DH26 115 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ATP9AO75110 1047 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 TOM1L1O75674 476 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CFAP157Q5JU67 520 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 MAP4K3Q8IVH8 894 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 CCDC110Q8TBZ0 833 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 LRRC8CQ8TDW0 803 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 OSGEPQ9NPF4 335 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 NALCNQ8IZF0 1738 aa6.7□□□□□ -1.34
PRKDC-202ENST00000338368 ANKRD63C9JTQ0 380 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 STAMBPO95630 424 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 KRT3P12035 628 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 PTPRAP18433 802 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 MSH2P43246 934 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CLK2P49760 499 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 BBS9Q3SYG4 887 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 PARD3BQ8TEW8 1205 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.69□□□□□ -1.342e-6■■■■□ 19.8
PRKDC-202ENST00000338368 GTPBP10A4D1E9 387 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 WEE2P0C1S8 567 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TWF2Q6IBS0 349 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TMEM139Q8IV31 216 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NSMCE1Q8WV22 266 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 RUBCNQ92622 972 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SENP7Q9BQF6 1050 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TTC7AQ9ULT0 858 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TFRCP02786 760 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 IL9RQ01113 521 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SLC35G1Q2M3R5 365 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ATF7IP2Q5U623 682 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CDKL2Q92772 493 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 C18orf8Q96DM3 657 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 LCMT1Q9UIC8 334 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CAPN7Q9Y6W3 813 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TISP43B9A030 160 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NOP14P78316 857 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ARHGEF19Q8IW93 802 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ASNSD1Q9NWL6 643 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ASTN1O14525 1302 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 PI4K2BG5E9Z4 385 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 DGKZQ13574 1117 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 MMS22LQ6ZRQ5 1243 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 OR2W6PQ8NHA6 318 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ATP2A3Q93084 1043 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SHISA4Q96DD7 197 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ERAP1Q9NZ08 941 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 LMO7Q8WWI1 1683 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 RBP5P82980 135 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SIX6OS1Q8N1H7 587 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ATP6V1G3Q96LB4 118 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CXCL11O14625 94 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 GAS2O43903 313 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 GABPB2Q8TAK5 448 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 FAM193BQ96PV7 902 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CARD9Q9H257 536 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 M0QYV0 167 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 MMEP08473 750 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 PDGFRAP16234 1089 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NIF3L1Q9GZT8 377 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SEPT10Q9P0V9 454 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ATMINO43313 823 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ACSL3O95573 720 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ZKSCAN8Q15776 578 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NUGGCQ68CJ6 796 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SH2D3CQ8N5H7 860 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ATL2Q8NHH9 583 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms