RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 IRX2Q9BZI1 471 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 PDZD7Q9H5P4 517 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 SPC25Q9HBM1 224 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 DNAI1Q9UI46 699 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 PCNTO95613 3336 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GPR25O00155 361 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 TREHO43280 583 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 KIF5CO60282 957 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 TSPAN1O60635 241 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GFPT2O94808 682 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GNRH1P01148 92 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 CCDC172P0C7W6 258 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 MCF2P10911 925 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 GNAT1P11488 350 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 YY1P25490 414 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 MAP3K21Q5TCX8 1036 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 LMBRD2Q68DH5 695 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 PPP1R13LQ8WUF5 828 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 JAKMIP2Q96AA8 810 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 NT5C1BQ96P26 610 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 WDR24Q96S15 920 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 SYT11Q9BT88 431 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 LACRTQ9GZZ8 138 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 FAM49AQ9H0Q0 323 aaPredicted RBP16.71■□□□□ 0.27
LIMS1-202ENST00000338045 HDAC6Q9UBN7 1215 aa16.71■□□□□ 0.27
LIMS1-202ENST00000338045 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.26
LIMS1-202ENST00000338045 A0A087X0T9 212 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 A0A1B0GUA9 196 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 C17orf102A2RUQ5 167 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 FOXN3O00409 490 aaPredicted RBP16.7■□□□□ 0.26
LIMS1-202ENST00000338045 KRT86O43790 486 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 PGK1P00558 417 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 FAM228BP0C875 321 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 PRKAR2AP13861 404 aaKnown RBP16.7■□□□□ 0.26
LIMS1-202ENST00000338045 ELNP15502 786 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMS1-202ENST00000338045 ARHGAP44Q17R89 818 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 TMEM132AQ24JP5 1023 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 KIZQ2M2Z5 673 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 CCDC122Q5T0U0 273 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 ZNF710Q8N1W2 664 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 OLIG1Q8TAK6 271 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 FAM84AQ96KN4 292 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 SCLT1Q96NL6 688 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 GCOM2Q9BZD3 368 aaPredicted RBP16.7■□□□□ 0.26
LIMS1-202ENST00000338045 TSGA10Q9BZW7 698 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 BCCIPQ9P287 314 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIMS1-202ENST00000338045 TRIM10Q9UDY6 481 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 ADAMTS1Q9UHI8 967 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 NENFQ9UMX5 172 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 TFR2Q9UP52 801 aa16.7■□□□□ 0.26
LIMS1-202ENST00000338045 PJA2O43164 708 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 B4GALT4O60513 344 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 VNN1O95497 513 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 HLA-DRAP01903 254 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 HMGCRP04035 888 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CCND3P30281 292 aaPredicted RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 MAGEA1P43355 309 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 MFAP3P55082 362 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 GCNT1Q02742 428 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CDR2LQ86X02 465 aaPredicted RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 THNSL1Q8IYQ7 743 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 PPM1KQ8N3J5 372 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 C7orf31Q8N865 590 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CEP120Q8N960 986 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 KLHDC9Q8NEP7 349 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 OR5B17Q8NGF7 314 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 SHC3Q92529 594 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 KAT5Q92993 513 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 FAM81BQ96LP2 452 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 ERLIN2O94905 339 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CST5P28325 142 aaPredicted RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 ZNF200P98182 395 aaPredicted RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 KIF5AQ12840 1032 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 BMS1Q14692 1282 aaKnown RBP16.69■□□□□ 0.26
LIMS1-202ENST00000338045 KYAT1Q16773 422 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 ENOSF1Q7L5Y1 443 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 FAM71AQ8IYT1 594 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 PXYLP1Q8TE99 480 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 DNAJB3Q8WWF6 145 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 XPNPEP3Q9NQH7 507 aa16.69■□□□□ 0.26
LIMS1-202ENST00000338045 CENPFP49454 3210 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 CLTAP09496 248 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
LIMS1-202ENST00000338045 TMEM62Q0P6H9 643 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 BIRC3Q13489 604 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 CCSAPQ6IQ19 270 aaPredicted RBP16.68■□□□□ 0.26
LIMS1-202ENST00000338045 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 NME8Q8N427 588 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 TATDN2Q93075 761 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 CDHR5Q9HBB8 845 aa16.68■□□□□ 0.26
LIMS1-202ENST00000338045 LUC7LQ9NQ29 371 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms