RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
SPTLC1-202ENST00000337841 TNRC18O15417 2968 aaPredicted RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LCHNA4D1U4 455 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LINC01553A4QN01 128 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LACTBL1A8MY62 500 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 CETN3O15182 167 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 IL18RAPO95256 599 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 NR3C1P04150 777 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 KCNE1P15382 129 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LAG3P18627 525 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 BMP6P22004 513 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 TNFSF9P41273 254 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 ALDH7A1P49419 539 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 SCNN1GP51170 649 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 TAP1Q03518 808 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 GRIK3Q13003 919 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 ENOX2Q16206 610 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 NFIL3Q16649 462 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 EDRF1Q3B7T1 1238 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 XKR4Q5GH76 650 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 PPP2R2DQ66LE6 453 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 KLHL10Q6JEL2 608 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 CRELD2Q6UXH1 353 aaPredicted RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 LRRC55Q6ZSA7 311 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 RBM43Q6ZSC3 357 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 RDH13Q8NBN7 331 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 SNX27Q96L92 541 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 TMEM63CQ9P1W3 806 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 MRPL42Q9Y6G3 142 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 SIP14410 1827 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 TTC3P53804 2025 aa12.95□□□□□ -0.34
SPTLC1-202ENST00000337841 TMEM265A0A087WTH1 108 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 TTC26A0AVF1 554 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 FAM189A1O60320 539 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 FGFR1OPO95684 399 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 RB1P06400 928 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ADRB2P07550 413 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CXCL8P10145 99 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 NR2F2P24468 414 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 BMPR1AP36894 532 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 AFF1P51825 1210 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ERVK-21P61565 698 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 FKBP3Q00688 224 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ZBTB41Q5SVQ8 909 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ANKRD40Q6AI12 368 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 NELFBQ8WX92 580 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CLP1Q92989 425 aaKnown RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 COLEC11Q9BWP8 271 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CWH43Q9H720 699 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 ANO10Q9NW15 660 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 CNTN3Q9P232 1028 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 FAN1Q9Y2M0 1017 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 DERAQ9Y315 318 aa12.94□□□□□ -0.34
SPTLC1-202ENST00000337841 MYH11P35749 1972 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 PTGESO14684 152 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 DDHD2O94830 711 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 PAK1Q13153 545 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 TUSC3Q13454 348 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 SNRNP35Q16560 246 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 CEP135Q66GS9 1140 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 KCNT2Q6UVM3 1135 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 USP37Q86T82 979 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 NT5DC4Q86YG4 428 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 CBWD2Q8IUF1 395 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 BRSK2Q8IWQ3 736 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 ZNF576Q9H609 170 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 SPG21Q9NZD8 308 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 UBQLN1Q9UMX0 589 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-202ENST00000337841 SOX1O00570 391 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 MAPK13O15264 365 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ZC3H11AO75152 810 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 GALTP07902 379 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 KRT13P13646 458 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 CYP3A5P20815 502 aa12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 ERCC5P28715 1186 aaPredicted RBP12.92□□□□□ -0.34
SPTLC1-202ENST00000337841 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms