RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CLEC16AQ2KHT3 1053 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 HSDL1Q3SXM5 330 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 LRRC38Q5VT99 294 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 TDRD10Q5VZ19 366 aaKnown RBP5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 PLEKHA7Q6IQ23 1121 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 USP37Q86T82 979 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 ARHGEF19Q8IW93 802 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 TPCN2Q8NHX9 752 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 PXYLP1Q8TE99 480 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 PLIN2Q99541 437 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 CYP3A43Q9HB55 503 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 KMT5AQ9NQR1 393 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 GDAP2Q9NXN4 497 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 FLRT1Q9NZU1 646 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 GCNT4Q9P109 453 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 EFR3BQ9Y2G0 817 aa5.81□□□□□ -1.48
PRPF4B-201ENST00000337659 KRT86O43790 486 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 RTN2O75298 545 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ENDOD1O94919 500 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ALDH1A1P00352 501 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 TCP1P17987 556 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 CTNNA1P35221 906 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 PLA2G4FQ68DD2 849 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 RGMBQ6NW40 437 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 NT5DC3Q86UY8 548 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 C17orf53Q8N3J3 647 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 IPO4Q8TEX9 1081 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 PBKQ96KB5 322 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 MRPL4Q9BYD3 311 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 UVRAGQ9P2Y5 699 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 UMODL1Q5DID0 1318 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 A0A087X0T9 212 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 DENND3A2RUS2 1198 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 DPYSL4O14531 572 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 IQCF3P0C7M6 154 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 FAM228BP0C875 321 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 TNFAIP2Q03169 654 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 C1QBPQ07021 282 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 SREBF2Q12772 1141 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 EIF4EBP2Q13542 120 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ACVR2BQ13705 512 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 BRD3Q15059 726 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ZYXQ15942 572 aaKnown RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 UBXN11Q5T124 520 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 FBXO46Q6PJ61 603 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 CYFIP1Q7L576 1253 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 C2orf69Q8N8R5 385 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ACRBPQ8NEB7 543 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 FBXL13Q8NEE6 735 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 RFFLQ8WZ73 363 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 RAB20Q9NX57 234 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 MICAL3Q7RTP6 2002 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 CCL15-CCL14A0A0B4J2E2 113 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 EVI5O60447 810 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 TSPAN1O60635 241 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ECM2O94769 699 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 HOXA11P31270 313 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ARSEP51690 589 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 IKQ13123 557 aaPredicted RBP5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 TFDP1Q14186 410 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 HIC1Q14526 733 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 KCTD2Q14681 263 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ASIC2Q16515 512 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 CCL15Q16663 113 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 KLHL10Q6JEL2 608 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 BEND5Q7L4P6 421 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 TRPV1Q8NER1 839 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 STK32AQ8WU08 396 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 SLC10A4Q96EP9 437 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 CEP170P1Q96L14 293 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 AGPAT1Q99943 283 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 ZNF446Q9NWS9 450 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 GTF3C4Q9UKN8 822 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 FZD1Q9UP38 647 aa5.8□□□□□ -1.48
PRPF4B-201ENST00000337659 DUSP11O75319 330 aaKnown RBP5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 TACC1O75410 805 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 PLEKP08567 350 aaPredicted RBP5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 CLTAP09496 248 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 ECHS1P30084 290 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 PLS1Q14651 629 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 TNFAIP8L3Q5GJ75 292 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 LRRC52Q8N7C0 313 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 ZSWIM2Q8NEG5 633 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 WHAMMQ8TF30 809 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 TRIM11Q96F44 468 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 SNX27Q96L92 541 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 PKMYT1Q99640 499 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 SH3GL2Q99962 352 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 APOBEC3GQ9HC16 384 aaKnown RBP5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 SIX4Q9UIU6 781 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 ITGA11Q9UKX5 1188 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 DENND4CQ5VZ89 1909 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 GRIN2DO15399 1336 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 CCDC151A5D8V7 595 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 ACAP1Q15027 740 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 TPD52L1Q16890 204 aaPredicted RBP5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 LY6KQ17RY6 165 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 XKR9Q5GH70 373 aa5.79□□□□□ -1.48
PRPF4B-201ENST00000337659 PRAMEF18Q5VWM3 479 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms