RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 CNOT7Q9UIV1 285 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 LRRC41Q15345 812 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 HIF1AQ16665 826 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 THNSL1Q8IYQ7 743 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 PITPNM3Q9BZ71 974 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 SH3BP1Q9Y3L3 701 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 FAM208AQ9UK61 1670 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 HBP1O60381 514 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 KRT8P05787 483 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 SERPINB10P48595 397 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 AP2B1P63010 937 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 EGFL8Q99944 293 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
FN1-202ENST00000336916 FNDC3AQ9Y2H6 1198 aaKnown RBP12.95□□□□□ -0.34
FN1-202ENST00000336916 A8MXQ7 604 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 PI4K2BG5E9Z4 385 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 SPAG7O75391 227 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 SUPT3HO75486 399 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 NAF1Q96HR8 494 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 UVRAGQ9P2Y5 699 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 NRBP1Q9UHY1 535 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 TXNP10599 105 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 IFT88Q13099 833 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 PAWRQ96IZ0 340 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 RASSF10A6NK89 507 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 PAX3P23760 479 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 P4HA2O15460 535 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 PRKAB2O43741 272 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 MCF2P10911 925 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 ARL4DP49703 201 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 RFFLQ8WZ73 363 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 STK33Q9BYT3 514 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 CCDC88CQ9P219 2028 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 C3orf70A6NLC5 250 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 VCLP18206 1134 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 FRMD8P1Q9BZ68 369 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 BCL2L12Q9HB09 334 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 PIN4Q9Y237 131 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 HIST1H2AGP0C0S8 130 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 KRT4P19013 534 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 HIST1H2ADP20671 130 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 DCP1BQ8IZD4 617 aaKnown RBP12.94□□□□□ -0.34
FN1-202ENST00000336916 CXorf38Q8TB03 319 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 HIST1H2AHQ96KK5 128 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 HIST1H2AJQ99878 128 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 H2AFJQ9BTM1 129 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 CLCA2Q9UQC9 943 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 IPPQ9Y573 584 aa12.94□□□□□ -0.34
FN1-202ENST00000336916 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 CTIFO43310 598 aaKnown RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 SLC26A2P50443 739 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 HLFQ16534 295 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 AASDHQ4L235 1098 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 ATPAF2Q8N5M1 289 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 GYG2O15488 501 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 KPNA1P52294 538 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 CDC26Q8NHZ8 85 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 ETFBP38117 255 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 PLD1Q13393 1074 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 SYT2Q8N9I0 419 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 GPS1Q13098 491 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 KRCC1Q9NPI7 259 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 TBK1Q9UHD2 729 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ZNF263O14978 683 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ACSL3O95573 720 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ODC1P11926 461 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 KRT72Q14CN4 511 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 DTX3LQ8TDB6 740 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 GIMAP4Q9NUV9 329 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 BNIP3LO60238 219 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 EGFRP00533 1210 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 OR6P1Q8NGX9 317 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 RSPH10B2B2RC85 870 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 RSPH10BP0C881 870 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 HSPA1AP0DMV8 641 aaKnown RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 HSPA1BP0DMV9 641 aaKnown RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 MTMR2Q13614 643 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 SYTL3Q4VX76 610 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 PIP4K2CQ8TBX8 421 aa12.93□□□□□ -0.34
FN1-202ENST00000336916 PIH1D3Q9NQM4 214 aaKnown RBP12.93□□□□□ -0.34
FN1-202ENST00000336916 NDFIP2Q9NV92 336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms