RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PRKCEQ02156 737 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 NAB2Q15742 525 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ERICH1Q86X53 443 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ZNF564Q8TBZ8 553 aaPredicted RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 DHX38Q92620 1227 aaKnown RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 MIEF2Q96C03 454 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 CCDC97Q96F63 343 aaPredicted RBP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ANKRD36BP1Q96IX9 119 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 ISCUQ9H1K1 167 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 BCAS3Q9H6U6 928 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.3
HMG20A-201ENST00000336216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMG20A-201ENST00000336216 PASKQ96RG2 1323 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 GRID2IPA4D2P6 1211 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 JAK3P52333 1124 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 POLE2P56282 527 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 BPIFB4P59827 614 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 ITGB3BPQ13352 177 aaPredicted RBP6.9□□□□□ -1.31
HMG20A-201ENST00000336216 ECM1Q16610 540 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 HADHQ16836 314 aaKnown RBP6.9□□□□□ -1.31
HMG20A-201ENST00000336216 LONRF1Q17RB8 773 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.31
HMG20A-201ENST00000336216 FRMD5Q7Z6J6 570 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 TRIM50Q86XT4 487 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 FGFBP2Q9BYJ0 223 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 OSBPL7Q9BZF2 842 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 RPF1Q9H9Y2 349 aaKnown RBP6.9□□□□□ -1.31
HMG20A-201ENST00000336216 ETNK1Q9HBU6 452 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 ANAPC5Q9UJX4 755 aa6.9□□□□□ -1.31
HMG20A-201ENST00000336216 MYO5AQ9Y4I1 1855 aaKnown RBP6.9□□□□□ -1.31
HMG20A-201ENST00000336216 M0QZ92 97 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 IGF2BP3O00425 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 WDR46O15213 610 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TLR3O15455 904 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 VCAM1P19320 739 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 POLR2BP30876 1174 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 RWDD2BP57060 319 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 IFI35P80217 286 aaPredicted RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 CNTN2Q02246 1040 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 RFX8Q6ZV50 586 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 LMNTD2Q8IXW0 634 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 SRRM1Q8IYB3 904 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 NACA2Q9H009 215 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 APEX2Q9UBZ4 518 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 INPP5FQ9Y2H2 1132 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TMX2Q9Y320 296 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TAF1P21675 1872 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 H0YCG3 227 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 PPP1R11O60927 126 aaPredicted RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 GNA15P30679 374 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 HOXA10P31260 410 aaPredicted RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 CCNA1P78396 465 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 ZNF667Q5HYK9 610 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 STYK1Q6J9G0 422 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TRPM8Q7Z2W7 1104 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 KCTD6Q8NC69 237 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 EPS8L3Q8TE67 593 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 THAP2Q9H0W7 228 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 CNOT10Q9H9A5 744 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 CNTRLQ7Z7A1 2325 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 GON4LQ3T8J9 2241 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 SDK1Q7Z5N4 2213 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 SSU72P8A0A1W2PR75 194 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 SLITRK3O94933 977 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 UBOX5O94941 541 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 P4HA1P13674 534 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 OSBPP22059 807 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 PON1P27169 355 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 TMED2Q15363 201 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 ZNF699Q32M78 642 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 SPOPLQ6IQ16 392 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 MOB2Q70IA6 237 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 DCLK2Q8N568 766 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 ARMC2Q8NEN0 867 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 FBXO25Q8TCJ0 367 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 AGPAT1Q99943 283 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 NAGPAQ9UK23 515 aa6.89□□□□□ -1.31
HMG20A-201ENST00000336216 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.89□□□□□ -1.31
HMG20A-201ENST00000336216 KNL1Q8NG31 2342 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CCDC188H7C350 402 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 MEIS2O14770 477 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SHBGP04278 402 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PRLRP16471 622 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PSMA2P25787 234 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 GBP1P32455 592 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 SREBF1P36956 1147 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 RGS7P49802 495 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TFDP1Q14186 410 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 PREPLQ4J6C6 727 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 ZC3H18Q86VM9 953 aaKnown RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 LONP2Q86WA8 852 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CCDC33Q8N5R6 958 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 CCDC110Q8TBZ0 833 aa6.88□□□□□ -1.31
HMG20A-201ENST00000336216 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
HMG20A-201ENST00000336216 MMTAG2Q9BU76 263 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms