RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DEFB132Q7Z7B7 95 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 SLC13A5Q86YT5 568 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 PI4K2AQ9BTU6 479 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 FAM129AQ9BZQ8 928 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 TMEM117Q9H0C3 514 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 SMCHD1A6NHR9 2005 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 BTAF1O14981 1849 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 DRD4P21917 467 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 DLGAP5Q15398 846 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 HHATQ5VTY9 493 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 POMGNT1Q8WZA1 660 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 EZH1Q92800 747 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 MRRFQ96E11 262 aaKnown RBP17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 MXRA8Q9BRK3 442 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 WNT8AQ9H1J5 351 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 TOPORSQ9NS56 1045 aaPredicted RBP17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 SERPINA10Q9UK55 444 aa17.65■□□□□ 0.42
CDC42EP4-201ENST00000335793 PFASO15067 1338 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 ANKRD63C9JTQ0 380 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 MIS18BP1Q6P0N0 1132 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 C6orf89Q6UWU4 347 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 ZDHHC24Q6UX98 284 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 NT5C1BQ96P26 610 aa17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 DDX23Q9BUQ8 820 aaKnown RBP17.64■□□□□ 0.42
CDC42EP4-201ENST00000335793 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 ITGB5P18084 799 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 QARSP47897 775 aaKnown RBP17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 SLC27A3Q5K4L6 730 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 GSTA5Q7RTV2 222 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 COL23A1Q86Y22 540 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 EPS8L1Q8TE68 723 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 ARHGEF2Q92974 986 aaKnown RBP17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 FAM210AQ96ND0 272 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 GLIS2Q9BZE0 524 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 FOXO6A8MYZ6 492 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 THAP12O43422 761 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 ZNF131P52739 623 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 KRT17Q04695 432 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 NUGGCQ68CJ6 796 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 LMBRD2Q68DH5 695 aaPredicted RBP17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 CCDC63Q8NA47 563 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 KCND2Q9NZV8 630 aa17.64■□□□□ 0.41
CDC42EP4-201ENST00000335793 CDK5RAP2Q96SN8 1893 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 VIL1P09327 827 aaKnown RBP17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 RFX1P22670 979 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 YWHABP31946 246 aaKnown RBP17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 DRP2Q13474 957 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 SNRNP35Q16560 246 aaKnown RBP17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 TSC22D3Q99576 134 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 PIDD1Q9HB75 910 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 PAPOLBQ9NRJ5 636 aaKnown RBP17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 CCT8L1PA6NM43 557 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 NFIBO00712 420 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 ATP6V1G2O95670 118 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 PLS3P13797 630 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 SLC8A3P57103 927 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 MTMR1Q13613 665 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 KYNUQ16719 465 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 SEC14L1Q92503 715 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 RUNDC3BQ96NL0 473 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 GRHL1Q9NZI5 618 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 TMX2Q9Y320 296 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 NRAPQ86VF7 1730 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 UBE4BO95155 1302 aa17.63■□□□□ 0.41
CDC42EP4-201ENST00000335793 KLRG2A4D1S0 409 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 RIPK2O43353 540 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 AGTP01019 485 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 RARRES1P49788 294 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 SOX10P56693 466 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 DAB2IPQ5VWQ8 1189 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 ZDHHC14Q8IZN3 488 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 IL31RAQ8NI17 732 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 TLCD1Q96CP7 247 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 MYH11P35749 1972 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 RPTORQ8N122 1335 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 ATXN2Q99700 1313 aaKnown RBP17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 ENTPD3O75355 529 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 NEFHP12036 1026 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 KRT39Q6A163 491 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 C11orf63Q6NUN7 778 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 CAPN12Q6ZSI9 719 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 ZNF365Q70YC5 407 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 KCTD17Q8N5Z5 321 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 LMO3Q8TAP4 145 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 CPA5Q8WXQ8 436 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 EPAS1Q99814 870 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 SRRM3A6NNA2 597 aaPredicted RBP17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 NUDT17P0C025 328 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 CYP11B1P15538 503 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 GBP1P32455 592 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 PTGIRP43119 386 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 PAPOLAP51003 745 aaKnown RBP17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 TAS1R2Q8TE23 839 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 RPS6KC1Q96S38 1066 aa17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 RAVER2Q9HCJ3 691 aaKnown RBP17.62■□□□□ 0.41
CDC42EP4-201ENST00000335793 TCP11X1B4DZS4 312 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms