RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ACAP3Q96P50 834 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 CCDC94Q9BW85 323 aaPredicted RBP23.35■■□□□ 1.33
TPM1-204ENST00000334895 RGS18Q9NS28 235 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 NR2E3Q9Y5X4 410 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 TRIP11Q15643 1979 aa23.35■■□□□ 1.33
TPM1-204ENST00000334895 MEIS3P2A8K0S8 358 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 RECQL4O94761 1208 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 ADCY5O95622 1261 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 RAG1P15918 1043 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 ATF7P17544 494 aaPredicted RBP23.34■■□□□ 1.33
TPM1-204ENST00000334895 AKAP5P24588 427 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 POU5F1Q01860 360 aaKnown RBP23.34■■□□□ 1.33
TPM1-204ENST00000334895 PPP2R3AQ06190 1150 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 SEPT8Q92599 483 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 APOL6Q9BWW8 343 aa23.34■■□□□ 1.33
TPM1-204ENST00000334895 TSPYL2Q9H2G4 693 aaPredicted RBP23.34■■□□□ 1.33
TPM1-204ENST00000334895 A0A0U1RQF3 1178 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 TTC26A0AVF1 554 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 ZNF623O75123 536 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 AFPP02771 609 aaKnown RBP23.33■■□□□ 1.33
TPM1-204ENST00000334895 DLATP10515 647 aaKnown RBP23.33■■□□□ 1.33
TPM1-204ENST00000334895 RFC2P35250 354 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 CBWD6Q4V339 395 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 CBWD3Q5JTY5 395 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 CBWD5Q5RIA9 395 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 LMBRD2Q68DH5 695 aaPredicted RBP23.33■■□□□ 1.33
TPM1-204ENST00000334895 MFSD5Q6N075 450 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 MRPL10Q7Z7H8 261 aaKnown RBP23.33■■□□□ 1.33
TPM1-204ENST00000334895 ZNF516Q92618 1163 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 FTHL17Q9BXU8 183 aa23.33■■□□□ 1.33
TPM1-204ENST00000334895 LACTBL1A8MY62 500 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 C9IYK1 514 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 PES1O00541 588 aaKnown RBP23.33■■□□□ 1.32
TPM1-204ENST00000334895 CSF2RAP15509 400 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 FILIP1LQ4L180 1135 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 APBB2Q92870 758 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 FAM212AQ96EL1 285 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 SNX27Q96L92 541 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 CGRRF1Q99675 332 aa23.33■■□□□ 1.32
TPM1-204ENST00000334895 TULP1O00294 542 aaPredicted RBP23.32■■□□□ 1.32
TPM1-204ENST00000334895 CBFA2T2O43439 604 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 TPM2P07951 284 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 PBX1P40424 430 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 GCLMP48507 274 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 FMO5P49326 533 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 RAB27AP51159 221 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 ALKAL1Q6UXT8 129 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 ZNF598Q86UK7 904 aaKnown RBP23.32■■□□□ 1.32
TPM1-204ENST00000334895 EFCAB13Q8IY85 973 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 LPPQ93052 612 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 MRFAP1L1Q96HT8 127 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 MMRN2Q9H8L6 949 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 PRKAG2Q9UGJ0 569 aa23.32■■□□□ 1.32
TPM1-204ENST00000334895 PDCD11Q14690 1871 aaKnown RBP23.32■■□□□ 1.32
TPM1-204ENST00000334895 MICAL3Q7RTP6 2002 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 IL18RAPO95256 599 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 UBXN1Q04323 297 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 AGMOQ6ZNB7 445 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 FAM43BQ6ZT52 329 aaPredicted RBP23.31■■□□□ 1.32
TPM1-204ENST00000334895 SLC24A5Q71RS6 500 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 ECHDC2Q86YB7 292 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 OR5B17Q8NGF7 314 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 FNBP1Q96RU3 617 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 KLK14Q9P0G3 267 aa23.31■■□□□ 1.32
TPM1-204ENST00000334895 H0YGN5 161 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 ENPP3O14638 875 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 NFICP08651 508 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 FAM189BP81408 668 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 SURF1Q15526 300 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 XKR4Q5GH76 650 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 C15orf39Q6ZRI6 1047 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 USP37Q86T82 979 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 WDR49Q8IV35 697 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 ZMAT2Q96NC0 199 aaKnown RBP23.3■■□□□ 1.32
TPM1-204ENST00000334895 TMEM117Q9H0C3 514 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 ASB7Q9H672 318 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 PLEKHA5Q9HAU0 1116 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 PARP2Q9UGN5 583 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.3■■□□□ 1.32
TPM1-204ENST00000334895 ITGA4P13612 1032 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 TNNI1P19237 187 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 YARSP54577 528 aaKnown RBP23.3■■□□□ 1.32
TPM1-204ENST00000334895 JADE1Q6IE81 842 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 RNF19AQ9NV58 838 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 CNTN3Q9P232 1028 aa23.3■■□□□ 1.32
TPM1-204ENST00000334895 C4BPAP04003 597 aaKnown RBP23.29■■□□□ 1.32
TPM1-204ENST00000334895 GTF2H1P32780 548 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 KCNMA1Q12791 1236 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 SCARA3Q6AZY7 606 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 CNKSR3Q6P9H4 555 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 SV2AQ7L0J3 742 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 TMEM130Q8N3G9 435 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 TMEM199Q8N511 208 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 ERGIC2Q96RQ1 377 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 TMEM8AQ9HCN3 771 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 C1orf112Q9NSG2 853 aa23.29■■□□□ 1.32
TPM1-204ENST00000334895 SKIP12755 728 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 IBSPP21815 317 aaPredicted RBP23.28■■□□□ 1.32
TPM1-204ENST00000334895 KLK7P49862 253 aa23.28■■□□□ 1.32
TPM1-204ENST00000334895 MXI1P50539 228 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms