RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 ASB3Q9Y575 518 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 FAM189A1O60320 539 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 LILRB5O75023 590 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 OAZ2O95190 189 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 PLS3P13797 630 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 EPCAMP16422 314 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 MPZL3Q6UWV2 235 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 LIMS2Q7Z4I7 341 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 LEO1Q8WVC0 666 aaPredicted RBP7.03□□□□□ -1.28
USP16-201ENST00000334352 PBXIP1Q96AQ6 731 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 SHDQ96IW2 340 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 MAN1C1Q9NR34 630 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 TOPORSQ9NS56 1045 aaPredicted RBP7.03□□□□□ -1.28
USP16-201ENST00000334352 TBC1D7Q9P0N9 293 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 OBSL1O75147 1896 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 ARHGEF35A5YM69 484 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 XYLBO75191 536 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 MRE11P49959 708 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 PFKPQ01813 784 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 TAS1R3Q7RTX0 852 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 KSR1Q8IVT5 923 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 DAW1Q8N136 415 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 BSNDQ8WZ55 320 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 INTS4Q96HW7 963 aaKnown RBP7.03□□□□□ -1.28
USP16-201ENST00000334352 CLSTN3Q9BQT9 956 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 PRMT8Q9NR22 394 aaPredicted RBP7.03□□□□□ -1.28
USP16-201ENST00000334352 HCSTQ9UBK5 93 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 CDH7Q9ULB5 785 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 MYH11P35749 1972 aa7.03□□□□□ -1.28
USP16-201ENST00000334352 HELZP42694 1942 aaKnown RBP7.02□□□□□ -1.29
USP16-201ENST00000334352 MIA3Q5JRA6 1907 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 FRMD3A2A2Y4 597 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 WNT7AO00755 349 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 ZC3H11AO75152 810 aaKnown RBP eCLIP7.02□□□□□ -1.299e-6■■■■□ 20.6
USP16-201ENST00000334352 NPTXRO95502 500 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 KLRC2P26717 231 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 NEK4P51957 841 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 RNASELQ05823 741 aaKnown RBP7.02□□□□□ -1.29
USP16-201ENST00000334352 ATF7IP2Q5U623 682 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 RINT1Q6NUQ1 792 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 MICAL1Q8TDZ2 1067 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 LPPQ93052 612 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 SCLT1Q96NL6 688 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 NAP1L2Q9ULW6 460 aaPredicted RBP7.02□□□□□ -1.29
USP16-201ENST00000334352 DNM3Q9UQ16 869 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 PRRC2BQ5JSZ5 2229 aaKnown RBP7.02□□□□□ -1.29
USP16-201ENST00000334352 TMEM150BA6NC51 233 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 FAM205CA6NFA0 338 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 OR6C75A6NL08 312 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 TGM5O43548 720 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 TOM1L1O75674 476 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 SRGAP2CP0DJJ0 459 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 LAMP2P13473 410 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 FGFR4P22455 802 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 GTF2BQ00403 316 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 RARS2Q5T160 578 aaKnown RBP7.02□□□□□ -1.29
USP16-201ENST00000334352 DTWD2Q8NBA8 298 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 RNF39Q9H2S5 420 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 STK17AQ9UEE5 414 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 LRWD1Q9UFC0 647 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 PCDHGC5Q9Y5F6 944 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 CITO14578 2027 aa7.02□□□□□ -1.29
USP16-201ENST00000334352 DNAH12Q6ZR08 3092 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SPTBN5Q9NRC6 3674 aaKnown RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 ANO9A1A5B4 782 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 ZNF197O14709 1029 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SPTLC1O15269 473 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 XPOTO43592 962 aaKnown RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 FOXD2O60548 495 aaPredicted RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 JAK2O60674 1132 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 LRP3O75074 770 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 TDGF1P13385 188 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 DDX6P26196 483 aaKnown RBP eCLIP7.01□□□□□ -1.29
USP16-201ENST00000334352 TXKP42681 527 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 ZNF268Q14587 947 aaPredicted RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 IL17AQ16552 155 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 KRT79Q5XKE5 535 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 TMEM161BQ8NDZ6 487 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 DEPTORQ8TB45 409 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 PNMA5Q96PV4 448 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 GAD1Q99259 594 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 CCDC94Q9BW85 323 aaPredicted RBP7.01□□□□□ -1.29
USP16-201ENST00000334352 DSEQ9UL01 958 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 UBE4BO95155 1302 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 MEIS3P2A8K0S8 358 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 MARCH6O60337 910 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 PPP1R37O75864 691 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 CLTAP09496 248 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SDHBP21912 280 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 MLH1P40692 756 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 NPTX2P47972 431 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SCNN1GP51170 649 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 STK3Q13188 491 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 DTHD1Q6ZMT9 781 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 TAS1R1Q7RTX1 841 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 ERMP1Q7Z2K6 904 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 SYNPOQ8N3V7 929 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 APPL2Q8NEU8 664 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 DEPDC1BQ8WUY9 529 aa7.01□□□□□ -1.29
USP16-201ENST00000334352 GJA10Q969M2 543 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms