RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 RAB17Q9H0T7 212 aa20.3■□□□□ 0.84
RFTN1-201ENST00000334133 ZNFX1Q9P2E3 1918 aaKnown RBP20.29■□□□□ 0.84
RFTN1-201ENST00000334133 TLDC2A0PJX2 215 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 GZMAP12544 262 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 RPL21P46778 160 aaKnown RBP20.29■□□□□ 0.84
RFTN1-201ENST00000334133 DRP2Q13474 957 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 CCDC105Q8IYK2 499 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 KLRG1Q96E93 195 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 C1orf112Q9NSG2 853 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 SYNGAP1Q96PV0 1343 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 GJB6O95452 261 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 RARAP10276 462 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 RRM1P23921 792 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 BRDTQ58F21 947 aaPredicted RBP20.29■□□□□ 0.84
RFTN1-201ENST00000334133 MIS18BP1Q6P0N0 1132 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 TMC2Q8TDI7 906 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 TMEM174Q8WUU8 243 aa20.29■□□□□ 0.84
RFTN1-201ENST00000334133 MYH9P35579 1960 aaKnown RBP20.29■□□□□ 0.84
RFTN1-201ENST00000334133 MIF4GDA9UHW6 222 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SPATA31C2B4DYI2 1134 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 O00370 1275 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 KIAA0391O15091 583 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SUPT20HL2P0C7V6 817 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 GJC1P36383 396 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 PIK3CAP42336 1068 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 GNPTABQ3T906 1256 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SUPT20HL1Q3ZLR7 823 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 TDRD10Q5VZ19 366 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SEC14L1Q92503 715 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SENP7Q9BQF6 1050 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ZDHHC18Q9NUE0 388 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ARHGAP28Q9P2N2 729 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ZNF112Q9UJU3 913 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 DIS3Q9Y2L1 958 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 RLFQ13129 1914 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 PHF2O75151 1096 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 HLA-DRAP01903 254 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 PTGIRP43119 386 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ACAD10Q6JQN1 1059 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SLC17A8Q8NDX2 589 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 RDM1Q8NG50 284 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ATG4AQ8WYN0 398 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 CD101Q93033 1021 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 CYFIP2Q96F07 1278 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ZNF302Q9NR11 478 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 FBXO40Q9UH90 709 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 GTF3C4Q9UKN8 822 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 AGO2Q9UKV8 859 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 UMODL1Q5DID0 1318 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 HMGB1P1B2RPK0 211 aaPredicted RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 CYP1A2P05177 515 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 GLRA2P23416 452 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 HIRAP54198 1017 aaPredicted RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 HADHBP55084 474 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 MAGOHP61326 146 aaKnown RBP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 SF3A3Q12874 501 aaKnown RBP eCLIP20.28■□□□□ 0.84
RFTN1-201ENST00000334133 STRN3Q13033 797 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 ZDHHC24Q6UX98 284 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 CCDC25Q86WR0 208 aa20.28■□□□□ 0.84
RFTN1-201ENST00000334133 EBAG9O00559 213 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 MAFGO15525 162 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 MARK3P27448 753 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 TRIP13Q15645 432 aaPredicted RBP20.27■□□□□ 0.84
RFTN1-201ENST00000334133 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 CHADLQ6NUI6 762 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 XRRA1Q6P2D8 792 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 FAM212AQ96EL1 285 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 ADAMTS5Q9UNA0 930 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 PHIPQ8WWQ0 1821 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 PARP14Q460N5 1801 aa20.27■□□□□ 0.84
RFTN1-201ENST00000334133 K7ERI5 159 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 FZD9O00144 591 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 FDX1P10109 184 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 SCP2P22307 547 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 FGFR4P22455 802 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 MAPK4P31152 587 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 CLEC16AQ2KHT3 1053 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 SLC13A5Q86YT5 568 aaPredicted RBP20.27■□□□□ 0.83
RFTN1-201ENST00000334133 DEPTORQ8TB45 409 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.27■□□□□ 0.83
RFTN1-201ENST00000334133 RPS6KC1Q96S38 1066 aa20.27■□□□□ 0.83
RFTN1-201ENST00000334133 MDH1P40925 334 aaKnown RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 ZBTB33Q86T24 672 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 OR5B17Q8NGF7 314 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 HVCN1Q96D96 273 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 HERPUD2Q9BSE4 406 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 HEMGNQ9BXL5 484 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 GINM1Q9NU53 330 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 DNAJC17Q9NVM6 304 aaKnown RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 E7EVH7 732 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 SLCO1A2P46721 670 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 STXBP2Q15833 593 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 TMEM270Q6UE05 265 aa20.26■□□□□ 0.83
RFTN1-201ENST00000334133 CRELD2Q6UXH1 353 aaPredicted RBP20.26■□□□□ 0.83
RFTN1-201ENST00000334133 LRIG3Q6UXM1 1119 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms