RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 INTS2Q9H0H0 1204 aaKnown RBP25.2■■□□□ 1.62
TSEN54-201ENST00000333213 TRPV6Q9H1D0 765 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 CEP72Q9P209 647 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 COQ4Q9Y3A0 265 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 TRPV2Q9Y5S1 764 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 FHOD1Q9Y613 1164 aa25.2■■□□□ 1.62
TSEN54-201ENST00000333213 B4GALT4O60513 344 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 THPOP40225 353 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 LBX1P52954 281 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 SCARA3Q6AZY7 606 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 CTU1Q7Z7A3 348 aaKnown RBP25.19■■□□□ 1.62
TSEN54-201ENST00000333213 FAM228AQ86W67 206 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 EHBP1Q8NDI1 1231 aa25.19■■□□□ 1.62
TSEN54-201ENST00000333213 EIF2AQ9BY44 585 aaKnown RBP25.19■■□□□ 1.62
TSEN54-201ENST00000333213 KBTBD13C9JR72 458 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 N4BP1O75113 896 aaKnown RBP25.18■■□□□ 1.62
TSEN54-201ENST00000333213 C4BPAP04003 597 aaKnown RBP25.18■■□□□ 1.62
TSEN54-201ENST00000333213 STAG3L1P0CL83 205 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 CXCL8P10145 99 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 TNNI1P19237 187 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 GTF2H1P32780 548 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 PTK7Q13308 1070 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 USP37Q86T82 979 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 RSPH3Q86UC2 560 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 OR5B17Q8NGF7 314 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 TAS1R2Q8TE23 839 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 EDEM3Q9BZQ6 932 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 LRRC53A6NM62 1247 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 STX10O60499 249 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 PHLDB3Q6NSJ2 640 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 RRAGAQ7L523 313 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 CCDC112Q8NEF3 446 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 CHP1Q99653 195 aa25.18■■□□□ 1.62
TSEN54-201ENST00000333213 NAA15Q9BXJ9 866 aaKnown RBP25.18■■□□□ 1.62
TSEN54-201ENST00000333213 ZACNQ401N2 412 aa25.17■■□□□ 1.62
TSEN54-201ENST00000333213 TDRD10Q5VZ19 366 aaKnown RBP25.17■■□□□ 1.62
TSEN54-201ENST00000333213 CACNA2D4Q7Z3S7 1137 aa25.17■■□□□ 1.62
TSEN54-201ENST00000333213 GPIHBP1Q8IV16 184 aa25.17■■□□□ 1.62
TSEN54-201ENST00000333213 CGRRF1Q99675 332 aa25.17■■□□□ 1.62
TSEN54-201ENST00000333213 A0A0U1RQG5 324 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 SOWAHDA6NJG2 315 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ARVCFO00192 962 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 MTF1Q14872 753 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 MEA1Q16626 185 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 IQCEQ6IPM2 695 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 NOTUMQ6P988 496 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 PDXDC1Q6P996 788 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ELMO3Q96BJ8 720 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 FAM212AQ96EL1 285 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ZNF333Q96JL9 665 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 FBXL5Q9UKA1 691 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 PLAGL2Q9UPG8 496 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 PIN4Q9Y237 131 aaKnown RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 NOD1Q9Y239 953 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ANK1P16157 1881 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 M0QZ92 97 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 NPTXRO95502 500 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 TNNT1P13805 278 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 MNX1P50219 401 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 CDK7P50613 346 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 SLC10A6Q3KNW5 377 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 SLC27A1Q6PCB7 646 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 FBXO46Q6PJ61 603 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 EFCAB13Q8IY85 973 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ZNF397Q8NF99 534 aaPredicted RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 ADPGKQ9BRR6 497 aa25.16■■□□□ 1.62
TSEN54-201ENST00000333213 AGO3Q9H9G7 860 aaKnown RBP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.16■■□□□ 1.62
TSEN54-201ENST00000333213 CLTAP09496 248 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 HNRNPH3P31942 346 aaKnown RBP25.15■■□□□ 1.62
TSEN54-201ENST00000333213 UBXN11Q5T124 520 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 RAD9BQ6WBX8 426 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 FBXL13Q8NEE6 735 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 RAB20Q9NX57 234 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 APEX2Q9UBZ4 518 aa25.15■■□□□ 1.62
TSEN54-201ENST00000333213 VNN1O95497 513 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 AXLP30530 894 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 NCBP1Q09161 790 aaKnown RBP25.14■■□□□ 1.62
TSEN54-201ENST00000333213 CETN1Q12798 172 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 ARHGEF19Q8IW93 802 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 PDCL2Q8N4E4 241 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 CXCL16Q9H2A7 254 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 RPF1Q9H9Y2 349 aaKnown RBP25.14■■□□□ 1.62
TSEN54-201ENST00000333213 ST3GAL5Q9UNP4 418 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 HES2Q9Y543 173 aa25.14■■□□□ 1.62
TSEN54-201ENST00000333213 RPLP2P05387 115 aaKnown RBP25.14■■□□□ 1.61
TSEN54-201ENST00000333213 ZNF618Q5T7W0 954 aa25.14■■□□□ 1.61
TSEN54-201ENST00000333213 WDR49Q8IV35 697 aa25.14■■□□□ 1.61
TSEN54-201ENST00000333213 CRISPLD2Q9H0B8 497 aa25.14■■□□□ 1.61
TSEN54-201ENST00000333213 LACTBL1A8MY62 500 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 ARHGAP6O43182 974 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 RPS6KA5O75582 802 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 HSPA1AP0DMV8 641 aaKnown RBP25.13■■□□□ 1.61
TSEN54-201ENST00000333213 HSPA1BP0DMV9 641 aaKnown RBP25.13■■□□□ 1.61
TSEN54-201ENST00000333213 GRM5P41594 1212 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 JAM2P57087 298 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 DCAF4L1Q3SXM0 396 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 TRAF7Q6Q0C0 670 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 TMEM130Q8N3G9 435 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 PI4K2AQ9BTU6 479 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms