RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 SCFD2Q8WU76 684 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 RNF25Q96BH1 459 aaPredicted RBP9.69□□□□□ -0.86
COPB2-201ENST00000333188 KCND1Q9NSA2 647 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 PARP2Q9UGN5 583 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 PNMA3Q9UL41 463 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 PNMA2Q9UL42 364 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 NOC2LQ9Y3T9 749 aaKnown RBP9.69□□□□□ -0.86
COPB2-201ENST00000333188 NR2E1Q9Y466 385 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 PPP2R3BQ9Y5P8 575 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 ALG6Q9Y672 507 aa9.69□□□□□ -0.86
COPB2-201ENST00000333188 MRPL42Q9Y6G3 142 aaKnown RBP9.69□□□□□ -0.86
COPB2-201ENST00000333188 LTBP3Q9NS15 1303 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 H3BRB1 525 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 ZEB2O60315 1214 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 C6orf222P0C671 652 aaPredicted RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 COMTP21964 271 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 GNA15P30679 374 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 PLA2G4AP47712 749 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 OAZ1P54368 228 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CCL14Q16627 93 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CDO1Q16878 200 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 TDRD10Q5VZ19 366 aaKnown RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 USP50Q70EL3 339 aaPredicted RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 TAS1R3Q7RTX0 852 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 OR2W6PQ8NHA6 318 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 C1orf54Q8WWF1 131 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 ZNF516Q92618 1163 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 OSMRQ99650 979 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 MKNK1Q9BUB5 465 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 TUT1Q9H6E5 874 aaKnown RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 ANKRD65E5RJM6 399 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 TTI1O43156 1089 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 IFNB1P01574 187 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 RRM1P23921 792 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 PPFIA1Q13136 1202 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CATSPER4Q7RTX7 472 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CCDC33Q8N5R6 958 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 ZNF564Q8TBZ8 553 aaPredicted RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 MAGOHBQ96A72 148 aaKnown RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 IQCDQ96DY2 449 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 C12orf42Q96LP6 360 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 GPR20Q99678 358 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 MRPL4Q9BYD3 311 aaKnown RBP9.68□□□□□ -0.86
COPB2-201ENST00000333188 TMEM8AQ9HCN3 771 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 PCDH10Q9P2E7 1040 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CACNG4Q9UBN1 327 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 POLIQ9UNA4 740 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 SNX24Q9Y343 169 aa9.68□□□□□ -0.86
COPB2-201ENST00000333188 CCDC151A5D8V7 595 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 MYO1FO00160 1098 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 RAD51CO43502 376 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 AKAP5P24588 427 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 NUMBP49757 651 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PLTPP55058 493 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PPIL2Q13356 520 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 MAP9Q49MG5 647 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 CELF3Q5SZQ8 465 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 ATF7IP2Q5U623 682 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PAPD7Q5XG87 772 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 ATG4AQ8WYN0 398 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 DMAC2Q9NW81 257 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 ADAM22Q9P0K1 906 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PCSK1NQ9UHG2 260 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PRRC2BQ5JSZ5 2229 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 SART1O43290 800 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 DAPK3O43293 454 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 CSPG5O95196 566 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 SLC25A27O95847 323 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 CETPP11597 493 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 SCP2P22307 547 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 GTF2H1P32780 548 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PPP1R7Q15435 360 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 SMTNL2Q2TAL5 461 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 ASTE1Q2TB18 679 aaPredicted RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 ZNF699Q32M78 642 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 C1orf220Q5T0J3 134 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 GSTA5Q7RTV2 222 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PRUNE1Q86TP1 453 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PNMA8AQ86V59 439 aaPredicted RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 KIAA0319LQ8IZA0 1049 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 HAPLN2Q9GZV7 340 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 RPF1Q9H9Y2 349 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 COG5Q9UP83 839 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 NUB1Q9Y5A7 615 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 GOLGA6BA6NDN3 693 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 H3BQF6 201 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 EXTL3O43909 919 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 PPP1R37O75864 691 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 ITGB3P05106 788 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 FAM153BP0C7A2 387 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 CTNNA2P26232 953 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 HNRNPH3P31942 346 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 RGS7P49802 495 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 NCKAP1LP55160 1127 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 TNNC1P63316 161 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 GPC5P78333 572 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 IFFO1Q0D2I5 559 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 IFRD2Q12894 506 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms