RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 ANKRD63C9JTQ0 380 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 TULP1O00294 542 aaPredicted RBP17.86■□□□□ 0.45
C11orf88-201ENST00000332814 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
C11orf88-201ENST00000332814 NCK2O43639 380 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 ZNF202O95125 648 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 CXCL8P10145 99 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 CAMK1Q14012 370 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 HSP90AA2PQ14568 343 aaPredicted RBP17.86■□□□□ 0.45
C11orf88-201ENST00000332814 HLA-CQ95604 372 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 HPS3Q969F9 1004 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 UROC1Q96N76 676 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 STRA6Q9BX79 667 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 IGFLR1Q9H665 355 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 TLE6Q9H808 572 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 AGO2Q9UKV8 859 aaKnown RBP17.86■□□□□ 0.45
C11orf88-201ENST00000332814 COG5Q9UP83 839 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 UBE4BO95155 1302 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 CHD9Q3L8U1 2897 aa17.86■□□□□ 0.45
C11orf88-201ENST00000332814 SMIM28A0A1B0GU29 152 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 FSD2A1L4K1 749 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 XPOTO43592 962 aaKnown RBP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 TADA2AO75478 443 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 ERVFC1P60507 584 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 KCNA1Q09470 495 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 ARMCX5Q6P1M9 558 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 SLC39A4Q6P5W5 647 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 NOC3LQ8WTT2 800 aaKnown RBP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 BCL7CQ8WUZ0 217 aaPredicted RBP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 FAM212AQ96EL1 285 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 FGFBP2Q9BYJ0 223 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 HAPLN2Q9GZV7 340 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 PLEKHA5Q9HAU0 1116 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 MARCH5Q9NX47 278 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 CNTN3Q9P232 1028 aa17.85■□□□□ 0.45
C11orf88-201ENST00000332814 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.85■□□□□ 0.45
C11orf88-201ENST00000332814 PLXNA4Q9HCM2 1894 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.84■□□□□ 0.45
C11orf88-201ENST00000332814 TISP43B9A030 160 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 FSCN2O14926 492 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 RPN1P04843 607 aaKnown RBP17.84■□□□□ 0.45
C11orf88-201ENST00000332814 URODP06132 367 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 SRGAP2BP0DMP2 458 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 KCNE1P15382 129 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 TNFSF9P41273 254 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 NRIP1P48552 1158 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 FAM160A1Q05DH4 1040 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 PSMD2Q13200 908 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 AAK1Q2M2I8 961 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 KIAA1841Q6NSI8 718 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 RBM23Q86U06 439 aaKnown RBP17.84■□□□□ 0.45
C11orf88-201ENST00000332814 CD302Q8IX05 232 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 PPP1R10Q96QC0 940 aaKnown RBP17.84■□□□□ 0.45
C11orf88-201ENST00000332814 ZBP1Q9H171 429 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 SLC39A2Q9NP94 309 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 CLDND1Q9NY35 253 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 ADAM28Q9UKQ2 775 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 SSX2IPQ9Y2D8 614 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 PCDHGC5Q9Y5F6 944 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 STYXL1Q9Y6J8 313 aa17.84■□□□□ 0.45
C11orf88-201ENST00000332814 SF3B1O75533 1304 aaKnown RBP eCLIP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 TDRD15B5MCY1 1934 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CXCL14O95715 111 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CTSAP10619 480 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 GARTP22102 1010 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 ACOT2P49753 483 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 ELAVL2Q12926 359 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 KMT5BQ4FZB7 885 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 XKR4Q5GH76 650 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 FUT10Q6P4F1 479 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 ALKAL1Q6UXT8 129 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 HS2ST1Q7LGA3 356 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 ADGRD2Q7Z7M1 963 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 NELFCDQ8IXH7 590 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 HASPINQ8TF76 798 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 KIF12Q96FN5 646 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 DDX27Q96GQ7 796 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CDCA3Q99618 268 aaPredicted RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 HERC2P3Q9BVR0 1158 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 PRDM6Q9NQX0 595 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 MRPL17Q9NRX2 175 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.44
C11orf88-201ENST00000332814 CPSF3Q9UKF6 684 aaKnown RBP17.83■□□□□ 0.44
C11orf88-201ENST00000332814 KIAA0391O15091 583 aaKnown RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 KIF20AO95235 890 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 KIF4AO95239 1232 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 SOD2P04179 222 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 PRR29P0C7W0 189 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 GLUD2P49448 558 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 EHHADHQ08426 723 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 HYAL1Q12794 435 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 ENOX2Q16206 610 aaKnown RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 ZBTB41Q5SVQ8 909 aa17.82■□□□□ 0.44
C11orf88-201ENST00000332814 FMR1NBQ8N0W7 255 aaPredicted RBP17.82■□□□□ 0.44
C11orf88-201ENST00000332814 GLIS3Q8NEA6 775 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms