RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PLEKHA5Q9HAU0 1116 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 KIAA1586Q9HCI6 787 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 TBC1D13Q9NVG8 400 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 MIOSQ9NXC5 875 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 HCSTQ9UBK5 93 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 PLAGL2Q9UPG8 496 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 LAMA2P24043 3122 aaKnown RBP17.47■□□□□ 0.39
LRRC28-202ENST00000331450 ATG2AQ2TAZ0 1938 aa17.47■□□□□ 0.39
LRRC28-202ENST00000331450 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 GOLGA8IPA6NC78 632 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 GOLGA8JA6NMD2 632 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 B4GALT3O60512 393 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 CA3P07451 260 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 KCNE1P15382 129 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 NR2F2P24468 414 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 DNAJB2P25686 324 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 WNT7BP56706 349 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 GRIK3Q13003 919 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 PAK1Q13153 545 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 BTG3Q14201 252 aaPredicted RBP17.46■□□□□ 0.39
LRRC28-202ENST00000331450 ANKRD40Q6AI12 368 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 KLHL10Q6JEL2 608 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 CBWD2Q8IUF1 395 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 URGCPQ8TCY9 931 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 NELFBQ8WX92 580 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
LRRC28-202ENST00000331450 MED15Q96RN5 788 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 RPS6KC1Q96S38 1066 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 CWH43Q9H720 699 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 RPF1Q9H9Y2 349 aaKnown RBP17.46■□□□□ 0.39
LRRC28-202ENST00000331450 CTNND2Q9UQB3 1225 aa17.46■□□□□ 0.39
LRRC28-202ENST00000331450 MRPL42Q9Y6G3 142 aaKnown RBP17.46■□□□□ 0.39
LRRC28-202ENST00000331450 SOX1O00570 391 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 PPP2R3AQ06190 1150 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 DSC1Q08554 894 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 SNRNP35Q16560 246 aaKnown RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 CLP1Q92989 425 aaKnown RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 ZMAT2Q96NC0 199 aaKnown RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 DUSP9Q99956 384 aaKnown RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 RBAKQ9NYW8 714 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-202ENST00000331450 KANSL3Q9P2N6 904 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 MSRAQ9UJ68 235 aa17.45■□□□□ 0.38
LRRC28-202ENST00000331450 CHD9Q3L8U1 2897 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 SMIM28A0A1B0GU29 152 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 BICDL2A1A5D9 508 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 LACTBL1A8MY62 500 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 MAPK13O15264 365 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 EXOC3O60645 756 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 DDHD2O94830 711 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 POMCP01189 267 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 CASP4P49662 377 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 TAP1Q03518 808 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
LRRC28-202ENST00000331450 ZBTB6Q15916 424 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 STX1AQ16623 288 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 GLRA4Q5JXX5 417 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 ZNF280BQ86YH2 543 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 CD302Q8IX05 232 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 TSG101Q99816 390 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 ASB7Q9H672 318 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 NRDE2Q9H7Z3 1164 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 RWDD2AQ9UIY3 292 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 TRIOBPQ9H2D6 2365 aa17.44■□□□□ 0.38
LRRC28-202ENST00000331450 ZNF233A6NK53 670 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 IL18RAPO95256 599 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 THP07101 528 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 RPL13P26373 211 aaKnown RBP17.43■□□□□ 0.38
LRRC28-202ENST00000331450 FKBP3Q00688 224 aaKnown RBP17.43■□□□□ 0.38
LRRC28-202ENST00000331450 TYRO3Q06418 890 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 CYP24A1Q07973 514 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 CT47A1Q5JQC4 288 aaPredicted RBP17.43■□□□□ 0.38
LRRC28-202ENST00000331450 SPRED2Q7Z698 418 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 COLGALT2Q8IYK4 626 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 MFSD14AQ96MC6 490 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 TSPAN18Q96SJ8 248 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
LRRC28-202ENST00000331450 DNAJB4Q9UDY4 337 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 DACH1Q9UI36 760 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 DERAQ9Y315 318 aa17.43■□□□□ 0.38
LRRC28-202ENST00000331450 AKAP3O75969 853 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 LETM1O95202 739 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 NFICP08651 508 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 ERCC5P28715 1186 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 STX17P56962 302 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 MCCD1P59942 119 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 SOX4Q06945 474 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 ADAM9Q13443 819 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 TUSC3Q13454 348 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 PSMD6Q15008 389 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 ZSCAN23Q3MJ62 389 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 HABP4Q5JVS0 413 aaKnown RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 JADE1Q6IE81 842 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-202ENST00000331450 EFCAB13Q8IY85 973 aa17.42■□□□□ 0.38
LRRC28-202ENST00000331450 PLEKHO2Q8TD55 490 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms