RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 TTLL6Q8N841 843 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RFFLQ8WZ73 363 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 VPS39Q96JC1 886 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 GGA2Q9UJY4 613 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 WDR64B1ANS9 1081 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM25AB3EWG3 89 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM25CB3EWG5 89 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM25GB3EWG6 89 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 SH2B2O14492 632 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PHF2O75151 1096 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 HSD17B3P37058 310 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FOXR1Q6PIV2 292 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ZNF554Q86TJ5 538 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 EGFL6Q8IUX8 553 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 MCRS1Q96EZ8 462 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ZNF341Q9BYN7 854 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 POLD4Q9HCU8 107 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RNF181Q9P0P0 153 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 AURKCQ9UQB9 309 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 MLH3Q9UHC1 1453 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 WDR19Q8NEZ3 1342 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TUBA4AP68366 448 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 C16orf72Q14CZ0 275 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FUKQ8N0W3 1084 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 GINS4Q9BRT9 223 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 THTPAQ9BU02 230 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 AFF2P51816 1311 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 B2RBV5 119 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ANGPT2O15123 496 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CYP21A2P08686 494 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CALB2P22676 271 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 IL13P35225 146 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PDIA2Q13087 525 aaKnown RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 KBTBD12Q3ZCT8 623 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TMTC4Q5T4D3 741 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PPP4R4Q6NUP7 873 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TRAPPC11Q7Z392 1133 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PRPF39Q86UA1 669 aaKnown RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FBXO11Q86XK2 927 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 EAF2Q96CJ1 260 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ASAP1Q9ULH1 1129 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ZNF804BA4D1E1 1349 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 STK36Q9NRP7 1315 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CDC42BPAQ5VT25 1732 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 GSNP06396 782 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PTPN4P29074 926 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 B3GNT6Q6ZMB0 384 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 NLRP9Q7RTR0 991 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 SETD3Q86TU7 594 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RAET1EQ8TD07 263 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RMND5BQ96G75 393 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TMEM106CQ9BVX2 250 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 MMADHCQ9H3L0 296 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ANKZF1Q9H8Y5 726 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TMEM94Q12767 1356 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CCDC78A2IDD5 438 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ZNF185O15231 689 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 JAK1P23458 1154 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CLK1P49759 484 aaKnown RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 GPS1Q13098 491 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ALCAMQ13740 583 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 COL23A1Q86Y22 540 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 LRRC34Q8IZ02 419 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RDH13Q8NBN7 331 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ASPSCR1Q9BZE9 553 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 UBE2TQ9NPD8 197 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 NSMCE4AQ9NXX6 385 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 AHCTF1Q8WYP5 2266 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PJA2O43164 708 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 RHOBTB1O94844 696 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 KRT17Q04695 432 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ITGB3BPQ13352 177 aaPredicted RBP5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 KRT33BQ14525 404 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 ODR4Q5SWX8 454 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TC2NQ8N9U0 490 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 JADE3Q92613 823 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 CAVIN3Q969G5 261 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 EDEM3Q9BZQ6 932 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 TRIM8Q9BZR9 551 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 PIDD1Q9HB75 910 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 NRBP2Q9NSY0 501 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 EURLQ9NYK6 297 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 KIAA1024Q9UPX6 916 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 KLHL20Q9Y2M5 609 aa5.66□□□□□ -1.5
SDR42E1-201ENST00000328945 FGAP02671 866 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 GCLCP48506 637 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 HIF1AQ16665 826 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 LONRF1Q17RB8 773 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 USP38Q8NB14 1042 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 TTC13Q8NBP0 860 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 FHDC1Q9C0D6 1143 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 PCDHB4Q9Y5E5 795 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 FAM95CA0A1B0GW59 222 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 TEX33O43247 280 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 KRT16P08779 473 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 MYBL1P10243 752 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 IFNAR1P17181 557 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SMARCA1P28370 1054 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms