RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 FAM71AQ8IYT1 594 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 SPDL1Q96EA4 605 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 AAASQ9NRG9 546 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 CHST7Q9NS84 486 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 HSPBP1Q9NZL4 362 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 TRIM33Q9UPN9 1127 aa15.6■□□□□ 0.09
SSBP3-201ENST00000326956 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 CHRM1P11229 460 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 CEP55Q53EZ4 464 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 FAM182BQ5T319 152 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 RMDN2Q96LZ7 410 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 MOV10L1Q9BXT6 1211 aaKnown RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 TMX4Q9H1E5 349 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 NOCTQ9UK39 431 aaKnown RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 FOCADQ5VW36 1801 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 RASA4BC9J798 803 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 RASA4O43374 803 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 SKAP2O75563 359 aaPredicted RBP15.59■□□□□ 0.09
SSBP3-201ENST00000326956 GCKP35557 465 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 FMO1Q01740 532 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 SLCO2A1Q92959 643 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 CCDC127Q96BQ5 260 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 CRAMP1Q96RY5 1269 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 UNC45AQ9H3U1 944 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 PRR12Q9ULL5 1215 aa15.59■□□□□ 0.09
SSBP3-201ENST00000326956 GOLGA8IPA6NC78 632 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 GOLGA8JA6NMD2 632 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 PIK3CDO00329 1044 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 PTK6Q13882 451 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 TNIP1Q15025 636 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 TMED2Q15363 201 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 MTFR1Q15390 333 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 RNF43Q68DV7 783 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 CCDC174Q6PII3 467 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 SP8Q8IXZ3 490 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 BBOF1Q8ND07 529 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 ATL2Q8NHH9 583 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 TMEM117Q9H0C3 514 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 NINJ2Q9NZG7 142 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 PKD2L1Q9P0L9 805 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 NAALADL1Q9UQQ1 740 aa15.58■□□□□ 0.09
SSBP3-201ENST00000326956 KRT5P13647 590 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 CYP11B1P15538 503 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 MPP2Q14168 576 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 STAT4Q14765 748 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 RBM26Q5T8P6 1007 aaKnown RBP15.58■□□□□ 0.08
SSBP3-201ENST00000326956 SEPT14Q6ZU15 432 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 SIAH1Q8IUQ4 282 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 FAXDC2Q96IV6 333 aa15.58■□□□□ 0.08
SSBP3-201ENST00000326956 WRAP73Q9P2S5 460 aaPredicted RBP15.58■□□□□ 0.08
SSBP3-201ENST00000326956 LUC7L3O95232 432 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CALRP27797 417 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ALDH3A1P30838 453 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 SKIV2L2P42285 1042 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 STAT2P52630 851 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CDR2Q01850 454 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 TAF11Q15544 211 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CYP4F22Q6NT55 531 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 GSTA5Q7RTV2 222 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 MIER3Q7Z3K6 550 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 NT5C1BQ96P26 610 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 IPO5O00410 1097 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ATP5HO75947 161 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 UNC5CO95185 931 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 GH2P01242 217 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ACAD10Q6JQN1 1059 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 RHBDF2Q6PJF5 856 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 TRMT1LQ7Z2T5 733 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 KCNV2Q8TDN2 545 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 C9orf72Q96LT7 481 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 KREMEN1Q96MU8 473 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ZNF570Q96NI8 536 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ADAM22Q9P0K1 906 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 PRKAG3Q9UGI9 489 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 FAM47DPA6NHR8 397 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 TOM1O60784 492 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 HOXA10P31260 410 aaPredicted RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 SSR1P43307 286 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ANKRD20A2Q5SQ80 823 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ANKRD20A1Q5TYW2 823 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 ANKRD20A3Q5VUR7 823 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CAPRIN2Q6IMN6 1127 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CYP4X1Q8N118 509 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 CCDC89Q8N998 374 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
SSBP3-201ENST00000326956 SHC3Q92529 594 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 HEMGNQ9BXL5 484 aa15.57■□□□□ 0.08
SSBP3-201ENST00000326956 SORBS3O60504 671 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ARP10275 920 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 CEP128Q6ZU80 1094 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ASRGL1Q7L266 308 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 DAW1Q8N136 415 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 PWWP2AQ96N64 755 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 DCLK3Q9C098 648 aa15.56■□□□□ 0.08
SSBP3-201ENST00000326956 ZBTB21Q9ULJ3 1066 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms