RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 FMO1Q01740 532 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 SGSM3Q96HU1 749 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 RIT2Q99578 217 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 CCDC77Q9BR77 488 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 ABCF3Q9NUQ8 709 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 PCDHB4Q9Y5E5 795 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 NAA25Q14CX7 972 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 SLC15A2Q16348 729 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 TMEM270Q6UE05 265 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 KLHL29Q96CT2 875 aa13.77□□□□□ -0.21
HMGCS1-201ENST00000325110 GOLGA8SH3BPF8 625 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 GOLGA8MH3BSY2 632 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 RFX1P22670 979 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 NPTX2P47972 431 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 ZNF131P52739 623 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 DYNLT1P63172 113 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 BTNL9Q6UXG8 535 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 SV2AQ7L0J3 742 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 N4BP2L2Q92802 583 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 GTF3C4Q9UKN8 822 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 BTAF1O14981 1849 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 RALAP11233 206 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 TPX2Q9ULW0 747 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 MYH11P35749 1972 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 RARGP13631 454 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 CHRNB2P17787 502 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 TRPM8Q7Z2W7 1104 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 CNKSR1Q969H4 720 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 TBX20Q9UMR3 447 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 UBE4BO95155 1302 aa13.76□□□□□ -0.21
HMGCS1-201ENST00000325110 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 SUN1O94901 812 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 PTGIRP43119 386 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 CDR2Q01850 454 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 PRKG1Q13976 671 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 BRDTQ58F21 947 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 YTHDF3Q7Z739 585 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 ZKSCAN4Q969J2 545 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 ADAM22Q9P0K1 906 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 SPDYE2BA6NHP3 402 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 WDR64B1ANS9 1081 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 UBOX5O94941 541 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 SPDYE6P0CI01 402 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 CLNS1AP54105 237 aaKnown RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 LIN9Q5TKA1 542 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 VSIG1Q86XK7 387 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 LMO3Q8TAP4 145 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 ZNF668Q96K58 619 aaPredicted RBP13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 RPS6KC1Q96S38 1066 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
HMGCS1-201ENST00000325110 GH1P01241 217 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 ASNSP08243 561 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 KRT10P13645 584 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 GBP1P32455 592 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 MMP14P50281 582 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 PSMC5P62195 406 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 MCF2L2Q86YR7 1114 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 PARD3BQ8TEW8 1205 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 TGS1Q96RS0 853 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 RASA4BC9J798 803 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 O00370 1275 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 RASA4O43374 803 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 PIAS1O75925 651 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 ATP5DP30049 168 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 MYO1EQ12965 1108 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 IZUMO3Q5VZ72 239 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 CROCCP2Q86T23 111 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 EXOC3L1Q86VI1 746 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 C1orf131Q8NDD1 294 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 PGM2Q96G03 612 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 SNF8Q96H20 258 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 SAYSD1Q9NPB0 183 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 NUDT17P0C025 328 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 STRN3Q13033 797 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 ALCAMQ13740 583 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 C6orf89Q6UWU4 347 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 FAM71AQ8IYT1 594 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 FAM151AQ8WW52 585 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 AGO4Q9HCK5 861 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 UVRAGQ9P2Y5 699 aa13.74□□□□□ -0.21
HMGCS1-201ENST00000325110 NENFQ9UMX5 172 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms