RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 RNF34Q969K3 372 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
VARS2-201ENST00000321897 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 TNNC2P02585 160 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 PSAPP07602 524 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 GNAT1P11488 350 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 DLG4P78352 724 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 SMTNL2Q2TAL5 461 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 THEMIS2Q5TEJ8 643 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 KLF6Q99612 283 aaPredicted RBP16.22■□□□□ 0.19
VARS2-201ENST00000321897 BATF3Q9NR55 127 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
VARS2-201ENST00000321897 MAPK13O15264 365 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 GYG2O15488 501 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 GRAP2O75791 330 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 GJB6O95452 261 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 NR3C2P08235 984 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 ESRRAP11474 423 aaPredicted RBP16.21■□□□□ 0.19
VARS2-201ENST00000321897 TARSP26639 723 aaKnown RBP16.21■□□□□ 0.19
VARS2-201ENST00000321897 PSMC5P62195 406 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 ZNF844Q08AG5 666 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.19
VARS2-201ENST00000321897 TEKT4Q8WW24 435 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 MAML1Q92585 1016 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 GINM1Q9NU53 330 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
VARS2-201ENST00000321897 HEY1Q9Y5J3 304 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 TRPA1O75762 1119 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 ANKMY2Q8IV38 441 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 CCDC33Q8N5R6 958 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 OTUD5Q96G74 571 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 RBAKQ9NYW8 714 aaPredicted RBP16.21■□□□□ 0.19
VARS2-201ENST00000321897 MEIS2O14770 477 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 KRT17Q04695 432 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 OR6B2Q6IFH4 312 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 SLC47A2Q86VL8 602 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 MICALL2Q8IY33 904 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 P3H4Q92791 437 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 SLC35C1Q96A29 364 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 NRBP2Q9NSY0 501 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 ABCF3Q9NUQ8 709 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 PCDHA10Q9Y5I2 948 aa16.21■□□□□ 0.19
VARS2-201ENST00000321897 MAP3K7O43318 606 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 SLITRK3O94933 977 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 UBTFL6P0CB48 400 aaPredicted RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 GNA15P30679 374 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 SERPINB4P48594 390 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 IFI35P80217 286 aaPredicted RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 SKOR1P84550 965 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 MDH1BQ5I0G3 518 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 TAS1R2Q8TE23 839 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 FGD4Q96M96 766 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 ZDHHC15Q96MV8 337 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 EDEM3Q9BZQ6 932 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 I3L4J1 428 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 DDX3XO00571 662 aaKnown RBP eCLIP16.2■□□□□ 0.18
VARS2-201ENST00000321897 NQO1P15559 274 aaKnown RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 DPEP1P16444 411 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 DALRD3Q5D0E6 543 aaKnown RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 KIAA1755Q5JYT7 1200 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 MIS18BP1Q6P0N0 1132 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 JAMLQ86YT9 394 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 AGAP11Q8TF27 550 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 ARHGEF26Q96DR7 871 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 KCNJ2P63252 427 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 EPM2AIP1Q7L775 607 aaPredicted RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 C4orf33Q8N1A6 199 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 CEP70Q8NHQ1 597 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 PIP4K2CQ8TBX8 421 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 MXRA8Q9BRK3 442 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 ATP6V0A4Q9HBG4 840 aa16.2■□□□□ 0.18
VARS2-201ENST00000321897 METTL5Q9NRN9 209 aaKnown RBP16.2■□□□□ 0.18
VARS2-201ENST00000321897 SLC8A3P57103 927 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 KLC1Q07866 573 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 PPP1R13LQ8WUF5 828 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 CAVIN3Q969G5 261 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 AGO2Q9UKV8 859 aaKnown RBP16.19■□□□□ 0.18
VARS2-201ENST00000321897 ARL2BPQ9Y2Y0 163 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 PIAS1O75925 651 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 SREBF1P36956 1147 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 DNAJC3Q13217 504 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 KCTD2Q14681 263 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 MEA1Q16626 185 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 FAM182AQ5T1J6 154 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 PARD3BQ8TEW8 1205 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 HEXIM2Q96MH2 286 aaKnown RBP16.19■□□□□ 0.18
VARS2-201ENST00000321897 UBXN6Q9BZV1 441 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 LRIG3Q6UXM1 1119 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 ERICH1Q86X53 443 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 NME8Q8N427 588 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 RNF149Q8NC42 400 aa16.19■□□□□ 0.18
VARS2-201ENST00000321897 NSUN6Q8TEA1 469 aaKnown RBP16.19■□□□□ 0.18
VARS2-201ENST00000321897 PIK3R5Q8WYR1 880 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms