RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PDGFCQ9NRA1 345 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 C1orf112Q9NSG2 853 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TMEM59LQ9UK28 342 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 NOC2LQ9Y3T9 749 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 PTPRJQ12913 1337 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 A0A0B4J269 797 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 KRIT1O00522 736 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 CLDN3O15551 220 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZBTB48P10074 688 aaPredicted RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 TXNP10599 105 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 GZMAP12544 262 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 CARSP49589 748 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 GCNT1Q02742 428 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 SNAPC2Q13487 334 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZACNQ401N2 412 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 SPOPLQ6IQ16 392 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 IFT20Q8IY31 132 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 RNF149Q8NC42 400 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 SCFD2Q8WU76 684 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 VPS18Q9P253 973 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ALG6Q9Y672 507 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 KIAA0391O15091 583 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 SART1O43290 800 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 RAD51CO43502 376 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 LDHAP00338 332 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 PIGRP01833 764 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 HLA-DRAP01903 254 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 C4BPAP04003 597 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ITGA4P13612 1032 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 PIK3CAP42336 1068 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 FAM193AP78312 1265 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 CLDN10P78369 228 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 CDR2Q01850 454 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 DMTNQ08495 405 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TRADDQ15628 312 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 KCNV1Q6PIU1 500 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZNF771Q7L3S4 317 aaPredicted RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZBTB33Q86T24 672 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TRAPPC12Q8WVT3 735 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 RUBCNQ92622 972 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 FAM167AQ96KS9 214 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 DDX47Q9H0S4 455 aaKnown RBP8.14□□□□□ -1.11
IFT88-201ENST00000319980 MROH8Q9H579 483 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 VIPAS39Q9H9C1 493 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 NFU1Q9UMS0 254 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 TRPC6Q9Y210 931 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 CLEC11AQ9Y240 323 aa8.14□□□□□ -1.11
IFT88-201ENST00000319980 ZC3H11AO75152 810 aaKnown RBP eCLIP8.13□□□□□ -1.11
IFT88-201ENST00000319980 FGGP02679 453 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 SCP2P22307 547 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 COPB2P35606 906 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 LAMTOR4Q0VGL1 99 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ZNF211Q13398 564 aaPredicted RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 MESDQ14696 234 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 NAA35Q5VZE5 725 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ENOSF1Q7L5Y1 443 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ADAT2Q7Z6V5 191 aaKnown RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 RHPN2Q8IUC4 686 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ATP8B4Q8TF62 1192 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 RIN2Q8WYP3 895 aaPredicted RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 DDX1Q92499 740 aaKnown RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 ZBTB10Q96DT7 871 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 FAM212AQ96EL1 285 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 TAF1DQ9H5J8 278 aaPredicted RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 TMEM134Q9H6X4 195 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ZBTB42B2RXF5 422 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 DDX3YO15523 660 aaKnown RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 MSCO60682 206 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 VNN1O95497 513 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 GJB1P08034 283 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 POTEJP0CG39 1038 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 TNFSF9P41273 254 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 EPHB4P54760 987 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ENPEPQ07075 957 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 GJC2Q5T442 439 aaPredicted RBP8.13□□□□□ -1.11
IFT88-201ENST00000319980 LDLRAD1Q5T700 205 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 DCAF12L1Q5VU92 463 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 IER5Q5VY09 327 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 CCDC62Q6P9F0 684 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 RASGEF1CQ8N431 466 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 OR5B17Q8NGF7 314 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 UBE2Q2Q8WVN8 375 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ALG3Q92685 438 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 KCNN1Q92952 543 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 GDF3Q9NR23 364 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 AMACRQ9UHK6 382 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ADAM21Q9UKJ8 722 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 LCTP09848 1927 aa8.13□□□□□ -1.11
IFT88-201ENST00000319980 ADGRA2Q96PE1 1338 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 GGCXP38435 758 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 EFNA5P52803 228 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 MXD4Q14582 209 aaPredicted RBP8.12□□□□□ -1.11
IFT88-201ENST00000319980 TTLL4Q14679 1199 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 PLCB4Q15147 1175 aa8.12□□□□□ -1.11
IFT88-201ENST00000319980 MAPK6Q16659 721 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms