RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MESDQ14696 234 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 UBAP2Q5T6F2 1119 aaKnown RBP16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 CDCA2Q69YH5 1023 aaPredicted RBP16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 ZNF280CQ8ND82 737 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 SLC30A5Q8TAD4 765 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 ELAC2Q9BQ52 826 aaKnown RBP16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 ATP8A1Q9Y2Q0 1164 aa16.67■□□□□ 0.26
SHROOM1-201ENST00000319854 KRT5P13647 590 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 C10orf76Q5T2E6 689 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 ARMC9Q7Z3E5 817 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 NT5DC3Q86UY8 548 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 ARMC2Q8NEN0 867 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 P3H4Q92791 437 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 DIAPH2O60879 1101 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 PTPRAP18433 802 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 MARCKSL1P49006 195 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 TMEM132BQ14DG7 1078 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 SEPT14Q6ZU15 432 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 PIGWQ7Z7B1 504 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 AGPAT1Q99943 283 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 FAM213AQ9BRX8 229 aa16.66■□□□□ 0.26
SHROOM1-201ENST00000319854 ENO4A6NNW6 628 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 MMEP08473 750 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ZKSCAN8Q15776 578 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 SEZ6Q53EL9 994 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 EIF1ADQ8N9N8 165 aaKnown RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 NEK9Q8TD19 979 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TMEM143Q96AN5 459 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TRIM51Q9BSJ1 452 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 GGA3Q9NZ52 723 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TBX20Q9UMR3 447 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 PCDHA10Q9Y5I2 948 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TAX1BP1Q86VP1 789 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 CCDC60Q8IWA6 550 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ATXN2LQ8WWM7 1075 aaKnown RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ZNF668Q96K58 619 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ADGRA3Q8IWK6 1321 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ZNF541Q9H0D2 1346 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 ZNF526Q8TF50 670 aaPredicted RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 RFFLQ8WZ73 363 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 SELENOSQ9BQE4 189 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 STRA6Q9BX79 667 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 MOV10L1Q9BXT6 1211 aaKnown RBP16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 EPB41L4BQ9H329 900 aa16.65■□□□□ 0.26
SHROOM1-201ENST00000319854 SMIM23A6NLE4 172 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 KIF3CO14782 793 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 RGS20O76081 388 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 CCND2P30279 289 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 IFI35P80217 286 aaPredicted RBP16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 MAP3K10Q02779 954 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 CRELD2Q6UXH1 353 aaPredicted RBP16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 TMEM161BQ8NDZ6 487 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 OLIG1Q8TAK6 271 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 ACTRT1Q8TDG2 376 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 GLG1Q92896 1179 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.256e-7■■■□□ 18.8
SHROOM1-201ENST00000319854 TLDC2A0PJX2 215 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 SCYL3Q8IZE3 742 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 KRT35Q92764 455 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 PCDHB18PQ96TA0 734 aa16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 DBR1Q9UK59 544 aaKnown RBP16.64■□□□□ 0.25
SHROOM1-201ENST00000319854 ACOT2P49753 483 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 KRT76Q01546 638 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 RIPK1Q13546 671 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 TRPM8Q7Z2W7 1104 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 NOP9Q86U38 636 aaKnown RBP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 PARD3BQ8TEW8 1205 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 ALG3Q92685 438 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 KREMEN1Q96MU8 473 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 UBOX5O94941 541 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 SARNPP82979 210 aaKnown RBP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 PRKCEQ02156 737 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 ZNF268Q14587 947 aaPredicted RBP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 DCAF12L1Q5VU92 463 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 PRMT1Q99873 361 aaKnown RBP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 ANKFY1Q9P2R3 1169 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 SMNDC1O75940 238 aaKnown RBP eCLIP16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 JAK3P52333 1124 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 GTF2BQ00403 316 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 MIS18BP1Q6P0N0 1132 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 LLGL2Q6P1M3 1020 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 KIF2BQ8N4N8 673 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 MICAL1Q8TDZ2 1067 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 PBKQ96KB5 322 aa16.63■□□□□ 0.25
SHROOM1-201ENST00000319854 JPH1Q9HDC5 661 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms