RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TMEM189-UBE2V1I3L0A0 370 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 RECQL4O94761 1208 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 MUTP22033 750 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 NAMPTP43490 491 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 ST3GAL1Q11201 340 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 PRPF4BQ13523 1007 aaKnown RBP15.7■□□□□ 0.1
RPP40-201ENST00000319533 TRIM29Q14134 588 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 PSMD5Q16401 504 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 MAPK6Q16659 721 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 FAM171A1Q5VUB5 890 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 PDXDC1Q6P996 788 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 CXCL16Q9H2A7 254 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 ARHGEF3Q9NR81 526 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 CDH7Q9ULB5 785 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 NUMBLQ9Y6R0 609 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 EP300Q09472 2414 aaPredicted RBP15.7■□□□□ 0.1
RPP40-201ENST00000319533 DOCK6Q96HP0 2047 aa15.7■□□□□ 0.1
RPP40-201ENST00000319533 STK25O00506 426 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 EDN1P05305 212 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 PRKCBP05771 671 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 FGFR3P22607 806 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 MCM7P33993 719 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
RPP40-201ENST00000319533 STARD6P59095 220 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 RAB33AQ14088 237 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 UVSSAQ2YD98 709 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 LIN9Q5TKA1 542 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 PADI6Q6TGC4 694 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.69■□□□□ 0.1
RPP40-201ENST00000319533 RTL10Q7L3V2 364 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 GRASPQ7Z6J2 395 aaPredicted RBP15.69■□□□□ 0.1
RPP40-201ENST00000319533 HASPINQ8TF76 798 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 FGF14Q92915 247 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 SIT1Q9Y3P8 196 aa15.69■□□□□ 0.1
RPP40-201ENST00000319533 VWA8A3KMH1 1905 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 CACNA1AO00555 2505 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 ADAM12O43184 909 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 C8AP07357 584 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPP40-201ENST00000319533 PPP2R5AQ15172 486 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 DCAF4L1Q3SXM0 396 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 PPM1LQ5SGD2 360 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 EEF1DP3Q658K8 133 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 DCLRE1AQ6PJP8 1040 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 PARM1Q6UWI2 310 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 CD300LGQ6UXG3 332 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 CEP57Q86XR8 500 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 PPP1R10Q96QC0 940 aaKnown RBP15.68■□□□□ 0.1
RPP40-201ENST00000319533 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
RPP40-201ENST00000319533 RPP25Q9BUL9 199 aaKnown RBP15.68■□□□□ 0.1
RPP40-201ENST00000319533 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
RPP40-201ENST00000319533 ARHGEF35A5YM69 484 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 XYLBO75191 536 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 LMNAP02545 664 aaKnown RBP15.67■□□□□ 0.1
RPP40-201ENST00000319533 OR52Z1P0C646 297 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 PRR29P0C7W0 189 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 EFNA5P52803 228 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 GPC5P78333 572 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 NTHL1P78549 312 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 NT5DC1Q5TFE4 455 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 MTSS1LQ765P7 747 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 ERMP1Q7Z2K6 904 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 PJA1Q8NG27 643 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 ERMNQ8TAM6 284 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 DEPTORQ8TB45 409 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 FGF13Q92913 245 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 SHDQ96IW2 340 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
RPP40-201ENST00000319533 MTRRQ9UBK8 725 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 KCNH3Q9ULD8 1083 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 USP20Q9Y2K6 914 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 BACE2Q9Y5Z0 518 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 FANCMQ8IYD8 2048 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 NOTCH4Q99466 2003 aa15.67■□□□□ 0.1
RPP40-201ENST00000319533 CCL16O15467 120 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 DCNP07585 359 aaKnown RBP15.66■□□□□ 0.1
RPP40-201ENST00000319533 GLULP15104 373 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 RFX1P22670 979 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 IGFBP6P24592 240 aaPredicted RBP15.66■□□□□ 0.1
RPP40-201ENST00000319533 FOSBP53539 338 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
RPP40-201ENST00000319533 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
RPP40-201ENST00000319533 C1orf210Q8IVY1 113 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 PIP4P2Q8N4L2 257 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 ITFG1Q8TB96 612 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 UROC1Q96N76 676 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
RPP40-201ENST00000319533 MYH15Q9Y2K3 1946 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 OTOGLQ3ZCN5 2332 aa15.66■□□□□ 0.1
RPP40-201ENST00000319533 SP9P0CG40 484 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 OR1D2P34982 312 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 ID4P47928 161 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 PRKCQQ04759 706 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 ZNF174Q15697 407 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 ECM1Q16610 540 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 UPP1Q16831 310 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 TMEM132AQ24JP5 1023 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms