RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 OTOP2Q7RTS6 562 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 FRMD5Q7Z6J6 570 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 SEPT8Q92599 483 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 NDST4Q9H3R1 872 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 KIAA0355O15063 1070 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 NFICP08651 508 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 GUCY2FP51841 1108 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 YARSP54577 528 aaKnown RBP16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 APBA1Q02410 837 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 MAN2A1Q16706 1144 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 FAM117BQ6P1L5 589 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 BRSK2Q8IWQ3 736 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 PARD3BQ8TEW8 1205 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 MKNK1Q9BUB5 465 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 METTL14Q9HCE5 456 aaKnown RBP16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CHST12Q9NRB3 414 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CACNG4Q9UBN1 327 aa16.71■□□□□ 0.27
PDLIM5-202ENST00000318007 CAPN15O75808 1086 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 TPM2P07951 284 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 CLTAP09496 248 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 FGFR1P11362 822 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 GRM5P41594 1212 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 MYBPC2Q14324 1141 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 DSC3Q14574 896 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 C1orf220Q5T0J3 134 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 JADE1Q6IE81 842 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 MFSD5Q6N075 450 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 EFCAB13Q8IY85 973 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 TMEM199Q8N511 208 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 OR5B17Q8NGF7 314 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 MFSD14AQ96MC6 490 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 HTATIP2Q9BUP3 242 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 KIAA1586Q9HCI6 787 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 SQORQ9Y6N5 450 aa16.7■□□□□ 0.26
PDLIM5-202ENST00000318007 ITGA4P13612 1032 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 ATF7P17544 494 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 BIRC3Q13489 604 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 UVSSAQ2YD98 709 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 GPIHBP1Q8IV16 184 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 SPC24Q8NBT2 197 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 GAD1Q99259 594 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 PLAGL2Q9UPG8 496 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 A0A0U1RQF3 1178 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 CAPN2P17655 700 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 GATMP50440 423 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 ZNF516Q92618 1163 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 RGS18Q9NS28 235 aa16.69■□□□□ 0.26
PDLIM5-202ENST00000318007 CEP290O15078 2479 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TRIP11Q15643 1979 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 A0A1B0GTH6 734 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 ZBBXA8MT70 800 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 ENPP3O14638 875 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 POMCP01189 267 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 ZNF75DP51815 510 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 LRMPQ12912 555 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 PSMD6Q15008 389 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 AGMOQ6ZNB7 445 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 SLC24A5Q71RS6 500 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 ECHDC2Q86YB7 292 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 DRC7Q8IY82 874 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 C18orf25Q96B23 403 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 CCDC51Q96ER9 411 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 SNX27Q96L92 541 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 RTN4Q9NQC3 1192 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 CITO14578 2027 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 CXCL10P02778 98 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 KRT19P08727 400 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TMEM191BP0C7N4 346 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 FMO5P49326 533 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 SCNN1GP51170 649 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 EPHB4P54760 987 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 MYL7Q01449 175 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 HELQQ8TDG4 1101 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 PI4K2AQ9BTU6 479 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 FTHL17Q9BXU8 183 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TUBGCP4Q9UGJ1 667 aa16.68■□□□□ 0.26
PDLIM5-202ENST00000318007 TTC26A0AVF1 554 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 ARL5CA6NH57 179 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 C9IYK1 514 aa16.67■□□□□ 0.26
PDLIM5-202ENST00000318007 ACTN1P12814 892 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms