RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 IFT74Q96LB3 600 aa22.13■■□□□ 1.13
TTC39C-202ENST00000317571 TXLNGYQ9BZA5 131 aa22.13■■□□□ 1.13
TTC39C-202ENST00000317571 UTP11Q9Y3A2 253 aaKnown RBP22.13■■□□□ 1.13
TTC39C-202ENST00000317571 CLDN10P78369 228 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 SKIDA1Q1XH10 827 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 TDRD10Q5VZ19 366 aaKnown RBP22.12■■□□□ 1.13
TTC39C-202ENST00000317571 LLGL2Q6P1M3 1020 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 JAMLQ86YT9 394 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 PCYT2Q99447 389 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 TRIM7Q9C029 511 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 SNCAIPQ9Y6H5 919 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 MYO1FO00160 1098 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 EXTL3O43909 919 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 STAM2O75886 525 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 KRT5P13647 590 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 CTNNA2P26232 953 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 LIG4P49917 911 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 POLGP54098 1239 aaPredicted RBP22.12■■□□□ 1.13
TTC39C-202ENST00000317571 GCNT1Q02742 428 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 SLC20A2Q08357 652 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 SIX1Q15475 284 aaPredicted RBP22.12■■□□□ 1.13
TTC39C-202ENST00000317571 CLEC16AQ2KHT3 1053 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 LRIG3Q6UXM1 1119 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 KDM7AQ6ZMT4 941 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 SEPT14Q6ZU15 432 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 PSPC1Q8WXF1 523 aaKnown RBP22.12■■□□□ 1.13
TTC39C-202ENST00000317571 LRRC45Q96CN5 670 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 ERP44Q9BS26 406 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 DHX33Q9H6R0 707 aaKnown RBP22.12■■□□□ 1.13
TTC39C-202ENST00000317571 ZNF302Q9NR11 478 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 FAM114A2Q9NRY5 505 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 BTBD7Q9P203 1132 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 STYXL1Q9Y6J8 313 aa22.12■■□□□ 1.13
TTC39C-202ENST00000317571 USP2O75604 605 aaPredicted RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 VNN1O95497 513 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 OATP04181 439 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 ICAM3P32942 547 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 CTNNA1P35221 906 aaKnown RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 ACAD10Q6JQN1 1059 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 ZDHHC24Q6UX98 284 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 UBL4BQ8N7F7 174 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 HOXC10Q9NYD6 342 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 A0A0G2JMZ2 1700 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 MYPNQ86TC9 1320 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 PHF2O75151 1096 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 C4BPAP04003 597 aaKnown RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 UNGP13051 313 aaPredicted RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 PSMD6Q15008 389 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 STXBP2Q15833 593 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 ZACNQ401N2 412 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 C2CD6Q53TS8 623 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 SH3D19Q5HYK7 790 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 C1orf131Q8NDD1 294 aaKnown RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 UBLCP1Q8WVY7 318 aaPredicted RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 NAP1L3Q99457 506 aaPredicted RBP22.11■■□□□ 1.13
TTC39C-202ENST00000317571 PORCNQ9H237 461 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 EPB41L4BQ9H329 900 aa22.11■■□□□ 1.13
TTC39C-202ENST00000317571 KIAA0391O15091 583 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 CFHP08603 1231 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 NR1D1P20393 614 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 DHX9Q08211 1270 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 EMC10Q5UCC4 262 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 WNT8AQ9H1J5 351 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 APOBEC3GQ9HC16 384 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 CNOT8Q9UFF9 292 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 PCDHA3Q9Y5H8 950 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 GOLGA6L10A0A0M3HER8 536 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 TTLL13PA6NNM8 815 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 ANKRD65E5RJM6 399 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 HLA-DRAP01903 254 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 UBA1P22314 1058 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 ARL2P36404 184 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 GUCY1A3Q02108 690 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 VGLL4Q14135 290 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 LLGL1Q15334 1064 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 UBAP2Q5T6F2 1119 aaKnown RBP22.1■■□□□ 1.13
TTC39C-202ENST00000317571 GRHL1Q9NZI5 618 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 SNX24Q9Y343 169 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 OTOFQ9HC10 1997 aa22.1■■□□□ 1.13
TTC39C-202ENST00000317571 PAPPA2Q9BXP8 1791 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 IGKV6D-21A0A0A0MT36 114 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 GSTTP1A0A1W2PQM5 241 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 ALDH5A1P51649 535 aaPredicted RBP22.09■■□□□ 1.13
TTC39C-202ENST00000317571 DRP2Q13474 957 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 PHLDB2Q86SQ0 1253 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 TARS2Q9BW92 718 aaKnown RBP22.09■■□□□ 1.13
TTC39C-202ENST00000317571 RAB17Q9H0T7 212 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 AGO2Q9UKV8 859 aaKnown RBP22.09■■□□□ 1.13
TTC39C-202ENST00000317571 SPOPO43791 374 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 ENPEPQ07075 957 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 SEZ6Q53EL9 994 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 LBX2Q6XYB7 198 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 ANKRD35Q8N283 1001 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 UVRAGQ9P2Y5 699 aa22.09■■□□□ 1.13
TTC39C-202ENST00000317571 LRRIQ4A6NIV6 560 aa22.08■■□□□ 1.13
TTC39C-202ENST00000317571 PPFIA2O75334 1257 aa22.08■■□□□ 1.13
TTC39C-202ENST00000317571 ACO1P21399 889 aaKnown RBP22.08■■□□□ 1.13
TTC39C-202ENST00000317571 PPARDQ03181 441 aa22.08■■□□□ 1.13
TTC39C-202ENST00000317571 DHX34Q14147 1143 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms