RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 TRIML2Q8N7C3 387 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 PDZD8Q8NEN9 1154 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MAGEB10Q96LZ2 347 aaPredicted RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TRAPPC9Q96Q05 1148 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MRPL1Q9BYD6 325 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 NARFQ9UHQ1 456 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 CYP2C9P11712 490 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 BRAFP15056 766 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 EEF1DP29692 281 aaKnown RBP9.31□□□□□ -0.92
COL6A5-202ENST00000312481 INPP1P49441 399 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 C2orf54Q08AI8 447 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 KCTD16Q68DU8 428 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 DNAJC10Q8IXB1 793 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 TTC17Q96AE7 1141 aa9.31□□□□□ -0.92
COL6A5-202ENST00000312481 MAGEA13PA6NCF6 341 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 HGSO14964 777 aaPredicted RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 TMED2Q15363 201 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 TMEM259Q4ZIN3 620 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 DARS2Q6PI48 645 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ZDHHC17Q8IUH5 632 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 NUP85Q9BW27 656 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ETNK1Q9HBU6 452 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 HOXC10Q9NYD6 342 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 COL14A1Q05707 1796 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SH3BP5O60239 455 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 PYGLP06737 847 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ABHD2P08910 425 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 PSMA2P25787 234 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 RPA1P27694 616 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 GJC1P36383 396 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SF3B3Q15393 1217 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SGSM1Q2NKQ1 1148 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 NIPA1Q7RTP0 329 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 MED15Q96RN5 788 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 FUT8Q9BYC5 575 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 GID8Q9NWU2 228 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SALL3Q9BXA9 1300 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 WFS1O76024 890 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ERBB2P04626 1255 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SLC26A2P50443 739 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 PDK2Q15119 407 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 COPG1Q9Y678 874 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SAC3D1A6NKF1 404 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 LPXNO60711 386 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 CDK8P49336 464 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SHC4Q6S5L8 630 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 XPO6Q96QU8 1125 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 NDEL1Q9GZM8 345 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 GRID1Q9ULK0 1009 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 CICQ96RK0 1608 aaPredicted RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ERI2A8K979 691 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 HNRNPH3P31942 346 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 RIPK1Q13546 671 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 PLS1Q14651 629 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 C1orf146Q5VVC0 180 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 EXD1Q8NHP7 514 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 GLG1Q92896 1179 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 EHD4Q9H223 541 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 PYGMP11217 842 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 GRIN1Q05586 938 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 EPHA7Q15375 998 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 CEP55Q53EZ4 464 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 OTUD7BQ6GQQ9 843 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF354CQ86Y25 554 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 DCDC2Q9UHG0 476 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 SNTNA6NMZ2 147 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 HHIPL2Q6UWX4 724 aa9.3□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF594Q96JF6 807 aaPredicted RBP9.3□□□□□ -0.92
COL6A5-202ENST00000312481 H3BNX3 289 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TIMM44O43615 452 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 VPS4BO75351 444 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 FMO5P49326 533 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ROR1Q01973 937 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ING2Q9H160 280 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 GYPCP04921 128 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SPDYAQ5MJ70 313 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CENPPQ6IPU0 288 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MAPKAPK5Q8IW41 473 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TRIM59Q8IWR1 403 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 OPTNQ96CV9 577 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 SEC16BQ96JE7 1060 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CXorf56Q9H5V9 222 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 MOCS3O95396 460 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 IGKV5-2P06315 115 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 APOBEC3FQ8IUX4 373 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF473Q8WTR7 871 aaKnown RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TNIP3Q96KP6 325 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 DCP1AQ9NPI6 582 aaPredicted RBP9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TMEM94Q12767 1356 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 TOGARAM1Q9Y4F4 1720 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 APOEP02649 317 aa9.29□□□□□ -0.92
COL6A5-202ENST00000312481 CCDC15Q0P6D6 951 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms