RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 FDXACB1Q9BRP7 624 aaPredicted RBP9□□□□□ -0.97
CHD6-201ENST00000309279 SELENOOQ9BVL4 669 aa9□□□□□ -0.97
CHD6-201ENST00000309279 SRRTQ9BXP5 876 aaKnown RBP9□□□□□ -0.97
CHD6-201ENST00000309279 CNTN3Q9P232 1028 aa9□□□□□ -0.97
CHD6-201ENST00000309279 GTF2A1LQ9UNN4 478 aa9□□□□□ -0.97
CHD6-201ENST00000309279 MYMKA6NI61 221 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
CHD6-201ENST00000309279 ZNF202O95125 648 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 IPO7O95373 1038 aaKnown RBP8.99□□□□□ -0.97
CHD6-201ENST00000309279 SRGAP2CP0DJJ0 459 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 NAMPTP43490 491 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 EPHB4P54760 987 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 EPHB1P54762 984 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 PTENP60484 403 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 UBE2HP62256 183 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 TMED1Q13445 227 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 CAPSQ13938 189 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 TFDP1Q14186 410 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 PCBP1Q15365 356 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD6-201ENST00000309279 CDCA2Q69YH5 1023 aaPredicted RBP8.99□□□□□ -0.97
CHD6-201ENST00000309279 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 SRGAP1Q7Z6B7 1085 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 RNF149Q8NC42 400 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 NLRP7Q8WX94 980 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 BSNDQ8WZ55 320 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 KCNN1Q92952 543 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 GBP4Q96PP9 640 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 C7orf25Q9BPX7 421 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 REEP2Q9BRK0 252 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 GCOM2Q9BZD3 368 aaPredicted RBP8.99□□□□□ -0.97
CHD6-201ENST00000309279 TRIM9Q9C026 710 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 PRO3102Q9H379 93 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 AGO3Q9H9G7 860 aaKnown RBP8.99□□□□□ -0.97
CHD6-201ENST00000309279 GINS2Q9Y248 185 aa8.99□□□□□ -0.97
CHD6-201ENST00000309279 NPHP3-ACAD11A0A0J9YXS1 232 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 FRMD3A2A2Y4 597 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 GHRP10912 638 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PYGBP11216 843 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PLS3P13797 630 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 DEFB128Q7Z7B8 93 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CEP57L1Q8IYX8 460 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 DBF4BQ8NFT6 615 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 SPIRE2Q8WWL2 714 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 APBB2Q92870 758 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 IFT74Q96LB3 600 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 NLRP4Q96MN2 994 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 TIGD1Q96MW7 591 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PPP1R16BQ96T49 567 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 IFIH1Q9BYX4 1025 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 MINDY3Q9H8M7 445 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 POLD4Q9HCU8 107 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CHCHD3Q9NX63 227 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 LARSQ9P2J5 1176 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 SERTAD1Q9UHV2 236 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PADI3Q9ULW8 664 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 NOC2LQ9Y3T9 749 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 MICAL3Q7RTP6 2002 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 SFI1A8K8P3 1242 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 GPR182O15218 404 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 RPS6KA5O75582 802 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ACRP10323 421 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CD52P31358 61 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PHKA2P46019 1235 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 NPTX2P47972 431 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PEX3P56589 373 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CACNB1Q02641 598 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 SFSWAPQ12872 951 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 DMP1Q13316 513 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 FAM187BQ17R55 369 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 TMEM240Q5SV17 173 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 RASIP1Q5U651 963 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CNKSR3Q6P9H4 555 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PSRC1Q6PGN9 363 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 ZNF365Q70YC5 407 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 METTL3Q86U44 580 aaKnown RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 FAM228AQ86W67 206 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ELOA2Q8IYF1 753 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 NKAIN3Q8N8D7 197 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 SEPT8Q92599 483 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 STAMQ92783 540 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PAGE5Q96GU1 130 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ZNF668Q96K58 619 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 SPAG5Q96R06 1193 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 FIZ1Q96SL8 496 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.98□□□□□ -0.976e-7■■□□□ 13.1
CHD6-201ENST00000309279 FAM167BQ9BTA0 163 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 CENPOQ9BU64 300 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 FTHL17Q9BXU8 183 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 FAM126AQ9BYI3 521 aaPredicted RBP8.98□□□□□ -0.97
CHD6-201ENST00000309279 C2orf40Q9H1Z8 148 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 FZD8Q9H461 694 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 PARVGQ9HBI0 331 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ERVK-5Q9HDB9 667 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 LMBRD1Q9NUN5 540 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ARHGAP28Q9P2N2 729 aa8.98□□□□□ -0.97
CHD6-201ENST00000309279 ST3GAL5Q9UNP4 418 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms