RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 INTS2Q9H0H0 1204 aaKnown RBP13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 ANKFY1Q9P2R3 1169 aa13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 CPSF3Q9UKF6 684 aaKnown RBP13.9□□□□□ -0.18
SHANK2-AS3-201ENST00000307548 A0A1B0GUA9 196 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CAND2O75155 1236 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CHRNA1P02708 482 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ACTN1P12814 892 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DARSP14868 501 aaKnown RBP13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 MATR3P43243 847 aaKnown RBP eCLIP13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GCLMP48507 274 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ACOT2P49753 483 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CRYBB1P53674 252 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FAM26DQ5JW98 314 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RAD9BQ6WBX8 426 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 UBE2Q1Q7Z7E8 422 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RSPH3Q86UC2 560 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TMEM40Q8WWA1 233 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CCDC127Q96BQ5 260 aa13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CELF4Q9BZC1 486 aaKnown RBP13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RBAKQ9NYW8 714 aaPredicted RBP13.89□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SOWAHDA6NJG2 315 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 LRRC53A6NM62 1247 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 B4GALT5O43286 388 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZSCAN12O43309 604 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TSPAN1O60635 241 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CSDE1O75534 798 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ARF4P18085 180 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 AXLP30530 894 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 JAM2P57087 298 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EEF1DP3Q658K8 133 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SV2AQ7L0J3 742 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PAWRQ96IZ0 340 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FNBP1Q96RU3 617 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 OSMRQ99650 979 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CHP1Q99653 195 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CDT1Q9H211 546 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 C11orf49Q9H6J7 331 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 APEX2Q9UBZ4 518 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TRPV2Q9Y5S1 764 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CDY2AQ9Y6F7 541 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EPN1Q9Y6I3 576 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TNRC18O15417 2968 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ATN1P54259 1190 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZACNQ401N2 412 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SFMBT2Q5VUG0 894 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 C17orf53Q8N3J3 647 aaPredicted RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 POP1Q99575 1024 aaKnown RBP13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CGRRF1Q99675 332 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PDZD7Q9H5P4 517 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NOD1Q9Y239 953 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ADGRG1Q9Y653 693 aa13.88□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 MROH7Q68CQ1 1323 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ERLIN2O94905 339 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 TUBB4AP04350 444 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CLTAP09496 248 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CTSHP09668 335 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 DLATP10515 647 aaKnown RBP13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 THPOP40225 353 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PRKCIP41743 596 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 APBA1Q02410 837 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZNF568Q3ZCX4 644 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZBTB41Q5SVQ8 909 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 HGSNATQ68CP4 663 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 IQCEQ6IPM2 695 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 APBB1IPQ7Z5R6 666 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 ZBTB33Q86T24 672 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 FAM81BQ96LP2 452 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 OSBPL7Q9BZF2 842 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NHEJ1Q9H9Q4 299 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PDE11AQ9HCR9 933 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RAB20Q9NX57 234 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 PPP2R2CQ9Y2T4 447 aa13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 BZW2Q9Y6E2 419 aaKnown RBP13.87□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 GOLGA6L9A6NEM1 432 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 EIF3CLB5ME19 914 aaKnown RBP13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 RBAK-RBAKDNI3L0D1 243 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 IL18RAPO95256 599 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 NDUFA10O95299 355 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 SERPING1P05155 500 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CKBP12277 381 aa13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 HOXA11P31270 313 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 CYLC1P35663 651 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-AS3-201ENST00000307548 WNT7BP56706 349 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 373.3 ms