RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.24
MRPL39-201ENST00000307301 LIG4P49917 911 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 GTF2BQ00403 316 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 MCL1Q07820 350 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 COASYQ13057 564 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 SMAD4Q13485 552 aaKnown RBP22.77■■□□□ 1.24
MRPL39-201ENST00000307301 BECN1Q14457 450 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 E2F4Q16254 413 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 ZC2HC1CQ53FD0 456 aaPredicted RBP22.77■■□□□ 1.24
MRPL39-201ENST00000307301 FUT10Q6P4F1 479 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 ALKAL1Q6UXT8 129 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 TMEM184AQ6ZMB5 413 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 SNX27Q96L92 541 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 ACAP3Q96P50 834 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 FAM50BQ9Y247 325 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 HCFC2Q9Y5Z7 792 aa22.77■■□□□ 1.24
MRPL39-201ENST00000307301 TNFRSF10AO00220 468 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 C2CD2LO14523 706 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 HNRNPDLO14979 420 aaKnown RBP22.76■■□□□ 1.23
MRPL39-201ENST00000307301 MEFVO15553 781 aaPredicted RBP22.76■■□□□ 1.23
MRPL39-201ENST00000307301 KIF4AO95239 1232 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 PIGRP01833 764 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 URODP06132 367 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 SRGAP2BP0DMP2 458 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 XKR4Q5GH76 650 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 TMEM87AQ8NBN3 555 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 SMRP1Q8NCR6 262 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 HASPINQ8TF76 798 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 STAMQ92783 540 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 DHX58Q96C10 678 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 CHAMP1Q96JM3 812 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 GPR62Q9BZJ7 368 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 ST6GALNAC4Q9H4F1 302 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 MRPL17Q9NRX2 175 aaKnown RBP22.76■■□□□ 1.23
MRPL39-201ENST00000307301 RCOR1Q9UKL0 485 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 PLXNA3P51805 1871 aa22.76■■□□□ 1.23
MRPL39-201ENST00000307301 SMIM28A0A1B0GU29 152 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 LILRB3O75022 631 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 TADA2AO75478 443 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 IDEP14735 1019 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 GLUD2P49448 558 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 ANKRD54Q6NXT1 300 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 SLC39A4Q6P5W5 647 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 MAP4K3Q8IVH8 894 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 B3GALT6Q96L58 329 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 ZMAT2Q96NC0 199 aaKnown RBP22.75■■□□□ 1.23
MRPL39-201ENST00000307301 GOLGA2P5Q9HBQ8 144 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 TBC1D7Q9P0N9 293 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 SEL1LQ9UBV2 794 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 TTC28Q96AY4 2481 aa22.75■■□□□ 1.23
MRPL39-201ENST00000307301 CNPP09543 421 aaKnown RBP22.74■■□□□ 1.23
MRPL39-201ENST00000307301 GAP43P17677 238 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 ABCD1P33897 745 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 SOX4Q06945 474 aaPredicted RBP22.74■■□□□ 1.23
MRPL39-201ENST00000307301 SMAD2Q15796 467 aaKnown RBP22.74■■□□□ 1.23
MRPL39-201ENST00000307301 KIAA0319Q5VV43 1072 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 ZNF720Q7Z2F6 126 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 CASP10Q92851 521 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 KLHL5Q96PQ7 755 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 EMILIN2Q9BXX0 1053 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 TNMDQ9H2S6 317 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 CUEDC2Q9H467 287 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 MRPL44Q9H9J2 332 aaKnown RBP22.74■■□□□ 1.23
MRPL39-201ENST00000307301 CHST7Q9NS84 486 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 CNTN3Q9P232 1028 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 VWA8A3KMH1 1905 aa22.74■■□□□ 1.23
MRPL39-201ENST00000307301 EPCAMP16422 314 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 DSG1Q02413 1049 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 SLC10A6Q3KNW5 377 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 RESP18Q5W5W9 173 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 KIAA1841Q6NSI8 718 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 SYCE2Q6PIF2 218 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 IQUBQ8NA54 791 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 SLC22A17Q8WUG5 538 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 APOL5Q9BWW9 433 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 PANK4Q9NVE7 773 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 KBTBD4Q9NVX7 518 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 SSX2IPQ9Y2D8 614 aa22.73■■□□□ 1.23
MRPL39-201ENST00000307301 USP15Q9Y4E8 981 aaPredicted RBP22.73■■□□□ 1.23
MRPL39-201ENST00000307301 SF3B1O75533 1304 aaKnown RBP eCLIP22.73■■□□□ 1.23
MRPL39-201ENST00000307301 FRMD3A2A2Y4 597 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 ANKRD63C9JTQ0 380 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 POLR2DO15514 142 aaKnown RBP22.72■■□□□ 1.23
MRPL39-201ENST00000307301 PPP1R37O75864 691 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 CXCL8P10145 99 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 KCNE1P15382 129 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 IGFBP6P24592 240 aaPredicted RBP22.72■■□□□ 1.23
MRPL39-201ENST00000307301 KLRC2P26717 231 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 TNFSF9P41273 254 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 CLCNKBP51801 687 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 USP41Q3LFD5 358 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 HERC4Q5GLZ8 1057 aaPredicted RBP22.72■■□□□ 1.23
MRPL39-201ENST00000307301 ZBTB41Q5SVQ8 909 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 HVCN1Q96D96 273 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 STRA6Q9BX79 667 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 S1PR5Q9H228 398 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 IKZF4Q9H2S9 585 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 CD320Q9NPF0 282 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 SLC38A7Q9NVC3 462 aa22.72■■□□□ 1.23
MRPL39-201ENST00000307301 FAM13BQ9NYF5 915 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms