RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TTC27Q6P3X3 843 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 CTAGE3PQ8IX95 158 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 RIOX1Q9H6W3 641 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 NDUFB10O96000 172 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 RARAP10276 462 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 BYSLQ13895 437 aaKnown RBP15.57■□□□□ 0.08
PTPN9-201ENST00000306726 ATP13A4Q4VNC1 1196 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 STXBP4Q6ZWJ1 553 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 ACER1Q8TDN7 264 aa15.57■□□□□ 0.08
PTPN9-201ENST00000306726 ITGA8P53708 1063 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 GPC5P78333 572 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 CBWD2Q8IUF1 395 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 PPP1R16BQ96T49 567 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 FAM129AQ9BZQ8 928 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 SLITRK6Q9H5Y7 841 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 TRPC6Q9Y210 931 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 MYH1P12882 1939 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 PDE4DIPQ5VU43 2346 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 TBC1D12O60347 775 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 CBX6O95503 412 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 RAD23BP54727 409 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 DGKZQ13574 1117 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 TMEM119Q4V9L6 283 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 C6orf118Q5T5N4 469 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 BSPRYQ5W0U4 402 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 DCAF15Q66K64 600 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 SCARA5Q6ZMJ2 495 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 FRMD5Q7Z6J6 570 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 SAE1Q9UBE0 346 aaPredicted RBP15.56■□□□□ 0.08
PTPN9-201ENST00000306726 APEX2Q9UBZ4 518 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 SLC12A6Q9UHW9 1150 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 KRT16P08779 473 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 ETS1P14921 441 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 POLE2P56282 527 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 PRELID2Q8N945 189 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 ACTRT1Q8TDG2 376 aa15.56■□□□□ 0.08
PTPN9-201ENST00000306726 E2F8A0AVK6 867 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 PDE6CP51160 858 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SPOPLQ6IQ16 392 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 PADI6Q6TGC4 694 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 CCDC77Q9BR77 488 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 MARCOQ9UEW3 520 aaPredicted RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 ASTN1O14525 1302 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 CFAP69A5D8W1 941 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SLC12A3P55017 1021 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 MUM1Q2TAK8 710 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 NPHS2Q9NP85 383 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 AGPAT3Q9NRZ7 376 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SUCLA2Q9P2R7 463 aaPredicted RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 CCDC195A0A1B0GUA6 201 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 HNRNPDLO14979 420 aaKnown RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 DDNO94850 711 aaPredicted RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 ECHS1P30084 290 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 ZCWPW2Q504Y3 356 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SYDE2Q5VT97 1194 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SPATA21Q7Z572 469 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 MSL3Q8N5Y2 521 aaKnown RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 TTC16Q8NEE8 873 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 ATP8B4Q8TF62 1192 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 DCPSQ96C86 337 aaKnown RBP15.55■□□□□ 0.08
PTPN9-201ENST00000306726 OSBPL1AQ9BXW6 950 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 SHCBP1LQ9BZQ2 653 aa15.55■□□□□ 0.08
PTPN9-201ENST00000306726 O00370 1275 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 PDXKO00764 312 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 GAS8O95995 478 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 CPP00450 1065 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 VAMP7P51809 220 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 PPP3CAQ08209 521 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 LRRC57Q8N9N7 239 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 FAM198AQ9UFP1 575 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 TGFB1I1O43294 461 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 SPATA31C1P0DKV0 1188 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 HOXD13P35453 343 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 RWDD2BP57060 319 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 SUPT20HL1Q3ZLR7 823 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 DCUN1D2Q6PH85 259 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 FAM228AQ86W67 206 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 IFT74Q96LB3 600 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 STK33Q9BYT3 514 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 CNOT10Q9H9A5 744 aaKnown RBP15.54■□□□□ 0.08
PTPN9-201ENST00000306726 USP15Q9Y4E8 981 aaPredicted RBP15.54■□□□□ 0.08
PTPN9-201ENST00000306726 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 SGK1O00141 431 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 EDIL3O43854 480 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 CD19P15391 556 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 GCFC2P16383 781 aaKnown RBP15.54■□□□□ 0.08
PTPN9-201ENST00000306726 EPHX2P34913 555 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 EPM2AIP1Q7L775 607 aaPredicted RBP15.54■□□□□ 0.08
PTPN9-201ENST00000306726 APBB1IPQ7Z5R6 666 aaPredicted RBP15.54■□□□□ 0.08
PTPN9-201ENST00000306726 VPS52Q8N1B4 723 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 FAM213AQ9BRX8 229 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 AGTPBP1Q9UPW5 1226 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 ADAMTSL1Q8N6G6 1762 aa15.54■□□□□ 0.08
PTPN9-201ENST00000306726 KIAA0391O15091 583 aaKnown RBP15.53■□□□□ 0.08
PTPN9-201ENST00000306726 ORC1Q13415 861 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 BIRC2Q13490 618 aa15.53■□□□□ 0.08
PTPN9-201ENST00000306726 MTMR2Q13614 643 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms