RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 PTGESO14684 152 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 PSMA7O14818 248 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 MEFVO15553 781 aaPredicted RBP24.31■■□□□ 1.48
HOXD4-201ENST00000306324 ZC3H11AO75152 810 aaKnown RBP eCLIP24.31■■□□□ 1.48
HOXD4-201ENST00000306324 THP07101 528 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 CD44P16070 742 aaKnown RBP24.31■■□□□ 1.48
HOXD4-201ENST00000306324 PPP2R3AQ06190 1150 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 GRIK3Q13003 919 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 KLHL10Q6JEL2 608 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 ALKAL1Q6UXT8 129 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 C12orf56Q8IXR9 622 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 XXYLT1Q8NBI6 393 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 CLP1Q92989 425 aaKnown RBP24.31■■□□□ 1.48
HOXD4-201ENST00000306324 SEMA6BQ9H3T3 888 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 ZNF576Q9H609 170 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 NRDE2Q9H7Z3 1164 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 TMEM63CQ9P1W3 806 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 TRAF3IP3Q9Y228 551 aa24.31■■□□□ 1.48
HOXD4-201ENST00000306324 SMIM28A0A1B0GU29 152 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 DDHD2O94830 711 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 NR3C1P04150 777 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 CTNNB1P35222 781 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 PPP1R2P41236 205 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 KLHL40Q2TBA0 621 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 ZNF697Q5TEC3 545 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 RDH13Q8NBN7 331 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 PLEKHA5Q9HAU0 1116 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 CNTN3Q9P232 1028 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 DNAJB4Q9UDY4 337 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 RWDD3Q9Y3V2 267 aa24.3■■□□□ 1.48
HOXD4-201ENST00000306324 TRANK1O15050 2925 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 TTC26A0AVF1 554 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 LACTBL1A8MY62 500 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 EXOC3O60645 756 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 LINC00271P0C7V0 271 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 LAG3P18627 525 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 PBX3P40426 434 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 ERVK-21P61565 698 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 SPAG1Q07617 926 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 XKR4Q5GH76 650 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 CBWD2Q8IUF1 395 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 ARNTL2Q8WYA1 636 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 SYAP1Q96A49 352 aaPredicted RBP24.29■■□□□ 1.48
HOXD4-201ENST00000306324 ZMAT2Q96NC0 199 aaKnown RBP24.29■■□□□ 1.48
HOXD4-201ENST00000306324 KIAA1586Q9HCI6 787 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 AAASQ9NRG9 546 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 RBAKQ9NYW8 714 aaPredicted RBP24.29■■□□□ 1.48
HOXD4-201ENST00000306324 PLXNA4Q9HCM2 1894 aa24.29■■□□□ 1.48
HOXD4-201ENST00000306324 TMEM265A0A087WTH1 108 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 ZNF233A6NK53 670 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 PPP1R3GB7ZBB8 358 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 B4GALT3O60512 393 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 FXR1P51114 621 aaKnown RBP eCLIP24.28■■□□□ 1.48
HOXD4-201ENST00000306324 SNRNP35Q16560 246 aaKnown RBP24.28■■□□□ 1.48
HOXD4-201ENST00000306324 EPC2Q52LR7 807 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 RBM43Q6ZSC3 357 aaKnown RBP24.28■■□□□ 1.48
HOXD4-201ENST00000306324 COLGALT1Q8NBJ5 622 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 P2RX5Q93086 422 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 DHTKD1Q96HY7 919 aaPredicted RBP24.28■■□□□ 1.48
HOXD4-201ENST00000306324 SAMD11Q96NU1 681 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 TSG101Q99816 390 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 TTYH1Q9H313 450 aaPredicted RBP24.28■■□□□ 1.48
HOXD4-201ENST00000306324 PCDHB12Q9Y5F1 795 aa24.28■■□□□ 1.48
HOXD4-201ENST00000306324 TRIM49BA6NDI0 452 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 KCNE1P15382 129 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 NR2F2P24468 414 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 BMPR1AP36894 532 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 ALDH7A1P49419 539 aaKnown RBP24.27■■□□□ 1.48
HOXD4-201ENST00000306324 BCAR1P56945 870 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 ZCWPW2Q504Y3 356 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 CENPPQ6IPU0 288 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 KCNT2Q6UVM3 1135 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 BRSK2Q8IWQ3 736 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 KIF12Q96FN5 646 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 FAM161BQ96MY7 647 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 ZNF558Q96NG5 402 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 PPP1R10Q96QC0 940 aaKnown RBP24.27■■□□□ 1.48
HOXD4-201ENST00000306324 CTNND2Q9UQB3 1225 aa24.27■■□□□ 1.48
HOXD4-201ENST00000306324 COL4A4P53420 1690 aaPredicted RBP24.27■■□□□ 1.48
HOXD4-201ENST00000306324 NT5C1B-RDH14C9J2C7 533 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 CCNE1P24864 410 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 RPL13P26373 211 aaKnown RBP24.26■■□□□ 1.47
HOXD4-201ENST00000306324 PMS1P54277 932 aaKnown RBP24.26■■□□□ 1.47
HOXD4-201ENST00000306324 POU5F1Q01860 360 aaKnown RBP24.26■■□□□ 1.47
HOXD4-201ENST00000306324 DSC1Q08554 894 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 TUSC3Q13454 348 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 NFKBIBQ15653 356 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 CEP135Q66GS9 1140 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 ANKRD40Q6AI12 368 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 SLC9A9Q8IVB4 645 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 CD302Q8IX05 232 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 COLGALT2Q8IYK4 626 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 FBXO22Q8NEZ5 403 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 NELFBQ8WX92 580 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 FBXL18Q96ME1 805 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 ASB7Q9H672 318 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 DMAC2Q9NW81 257 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 CASTOR2A6NHX0 329 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 IL18RAPO95256 599 aa24.26■■□□□ 1.47
HOXD4-201ENST00000306324 ALDH2P05091 517 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms