RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 CEP120Q8N960 986 aa17.13■□□□□ 0.33
FANCA-201ENST00000305699 TOPORSQ9NS56 1045 aaPredicted RBP17.13■□□□□ 0.33
FANCA-201ENST00000305699 KCNG1Q9UIX4 513 aa17.13■□□□□ 0.33
FANCA-201ENST00000305699 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
FANCA-201ENST00000305699 TRIP11Q15643 1979 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 NPHP3-ACAD11A0A0J9YXS1 232 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 SLC12A3P55017 1021 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
FANCA-201ENST00000305699 SIGLEC14Q08ET2 396 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 ELAVL2Q12926 359 aaKnown RBP17.12■□□□□ 0.33
FANCA-201ENST00000305699 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
FANCA-201ENST00000305699 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 GPR65Q8IYL9 337 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 KREMEN2Q8NCW0 462 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 SPIRE2Q8WWL2 714 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 PBXIP1Q96AQ6 731 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 TTPALQ9BTX7 342 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 KCND2Q9NZV8 630 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 FNIP2Q9P278 1114 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 USTQ9Y2C2 406 aa17.12■□□□□ 0.33
FANCA-201ENST00000305699 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 MYO10Q9HD67 2058 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 SLC26A4O43511 780 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 TGM5O43548 720 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 MCF2P10911 925 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
FANCA-201ENST00000305699 PSMD5Q16401 504 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 MPZL3Q6UWV2 235 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 GPBP1Q86WP2 473 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 TMEM161BQ8NDZ6 487 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 CMASQ8NFW8 434 aaPredicted RBP17.11■□□□□ 0.33
FANCA-201ENST00000305699 ACSF2Q96CM8 615 aaPredicted RBP17.11■□□□□ 0.33
FANCA-201ENST00000305699 PPP1R10Q96QC0 940 aaKnown RBP17.11■□□□□ 0.33
FANCA-201ENST00000305699 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
FANCA-201ENST00000305699 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 PTPRHQ9HD43 1115 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 ANKFY1Q9P2R3 1169 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 LIMD1Q9UGP4 676 aa17.11■□□□□ 0.33
FANCA-201ENST00000305699 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 MUC6Q6W4X9 2439 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 SMIM28A0A1B0GU29 152 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 RFPL2O75678 378 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 B3GAT3O94766 335 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 KRT18P05783 430 aaKnown RBP17.1■□□□□ 0.33
FANCA-201ENST00000305699 ASGR2P07307 311 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
FANCA-201ENST00000305699 CLCNKBP51801 687 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 MTMR3Q13615 1198 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 OTOP3Q7RTS5 596 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 SUGP1Q8IWZ8 645 aaKnown RBP17.1■□□□□ 0.33
FANCA-201ENST00000305699 ZDHHC14Q8IZN3 488 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 HDAC7Q8WUI4 952 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
FANCA-201ENST00000305699 BICD1Q96G01 975 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 UROC1Q96N76 676 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 ACAP3Q96P50 834 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 PLEKHA4Q9H4M7 779 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 LARSQ9P2J5 1176 aaKnown RBP17.1■□□□□ 0.33
FANCA-201ENST00000305699 SORCS3Q9UPU3 1222 aa17.1■□□□□ 0.33
FANCA-201ENST00000305699 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
FANCA-201ENST00000305699 TOM1L1O75674 476 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 MAPTP10636 758 aaKnown RBP17.09■□□□□ 0.33
FANCA-201ENST00000305699 PLCG1P19174 1290 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 GRIN1Q05586 938 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 NOLC1Q14978 699 aaKnown RBP eCLIP17.09■□□□□ 0.33
FANCA-201ENST00000305699 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
FANCA-201ENST00000305699 ARSHQ5FYA8 562 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 BMP8AQ7Z5Y6 402 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 ZBTB45Q96K62 511 aaPredicted RBP17.09■□□□□ 0.33
FANCA-201ENST00000305699 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 SLC38A7Q9NVC3 462 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 CITO14578 2027 aa17.09■□□□□ 0.33
FANCA-201ENST00000305699 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 H0YCG3 227 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 FAM13AO94988 1023 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 BRD1O95696 1058 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 C1RP00736 705 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 PROZP22891 400 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 MCM6Q14566 821 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 CYP26C1Q6V0L0 522 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.08■□□□□ 0.32
FANCA-201ENST00000305699 UBALD2Q8IYN6 164 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 MYCT1Q8N699 235 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 LNX1Q8TBB1 728 aaPredicted RBP17.08■□□□□ 0.32
FANCA-201ENST00000305699 SNX27Q96L92 541 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 ZHX3Q9H4I2 956 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 CLIC4Q9Y696 253 aa17.08■□□□□ 0.32
FANCA-201ENST00000305699 ZNF318Q5VUA4 2279 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 CLUHO75153 1309 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 TMEM189-UBE2V1I3L0A0 370 aa17.07■□□□□ 0.32
FANCA-201ENST00000305699 I3L4J1 428 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms