RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 ZC2HC1CQ53FD0 456 aaPredicted RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 ASPRV1Q53RT3 343 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 DSTYKQ6XUX3 929 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 KIAA0825Q8IV33 1275 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 HERPUD2Q9BSE4 406 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 BHMT2Q9H2M3 363 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 LRCH1Q9Y2L9 728 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 TRAFD1O14545 582 aaPredicted RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 GNPATO15228 680 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 MAGEB2O15479 319 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SPOPO43791 374 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 FGFR1P11362 822 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 NMT1P30419 496 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SGO2Q562F6 1265 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 C4orf50Q6ZRC1 276 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 LRRC8CQ8TDW0 803 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SLCO2A1Q92959 643 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SNF8Q96H20 258 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 C9orf72Q96LT7 481 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 GORASP1Q9BQQ3 440 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 DCLRE1BQ9H816 532 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 METTL5Q9NRN9 209 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 SRP68Q9UHB9 627 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 DNM3Q9UQ16 869 aa11.61□□□□□ -0.55
ZNF558-201ENST00000301475 ZNFX1Q9P2E3 1918 aaKnown RBP11.61□□□□□ -0.55
ZNF558-201ENST00000301475 ECE2O60344 883 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 DCTN3O75935 186 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 MYL7Q01449 175 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 TAF1BQ53T94 588 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 MAML1Q92585 1016 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 EZH1Q92800 747 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 TLE6Q9H808 572 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 CCNL1Q9UK58 526 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 EDF1O60869 148 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 TBCAO75347 108 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 KRT36O76013 467 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ITIH2P19823 946 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 RXRBP28702 533 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 VHLP40337 213 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 BTDP43251 543 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 CYP2J2P51589 502 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 RCN1Q15293 331 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 SNX30Q5VWJ9 437 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 AMIGO3Q86WK7 504 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 B4GALNT2Q8NHY0 566 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 LMO3Q8TAP4 145 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ETNPPLQ8TBG4 499 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 DENND1AQ8TEH3 1009 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 SH3TC2Q8TF17 1288 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 PSPC1Q8WXF1 523 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 P2RX7Q99572 595 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 VCXQ9H320 206 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ACP6Q9NPH0 428 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 MTMR4Q9NYA4 1195 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 RGL1Q9NZL6 768 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 FAM196BA6NMK8 535 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ATP9AO75110 1047 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 LGR5O75473 907 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 MARK3P27448 753 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 RPA1P27694 616 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 PTPN4P29074 926 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF543Q08ER8 600 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 CTC1Q2NKJ3 1217 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 NSMFQ6X4W1 530 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF804AQ7Z570 1209 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 CCNJLQ8IV13 435 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 ARHGEF19Q8IW93 802 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 CADM1Q9BY67 442 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
ZNF558-201ENST00000301475 STOML1Q9UBI4 398 aa11.6□□□□□ -0.55
ZNF558-201ENST00000301475 NRAPQ86VF7 1730 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 USP17L10C9JJH3 530 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 MTA2O94776 668 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 KCNA3P22001 575 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 MUTP22033 750 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 RRM1P23921 792 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 GCAP28676 217 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 PTK6Q13882 451 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 TRABD2AQ86V40 505 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 ZC3H18Q86VM9 953 aaKnown RBP11.59□□□□□ -0.55
ZNF558-201ENST00000301475 CCDC125Q86Z20 511 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 ZNF564Q8TBZ8 553 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-201ENST00000301475 SCG3Q8WXD2 468 aaKnown RBP11.59□□□□□ -0.55
ZNF558-201ENST00000301475 NUP85Q9BW27 656 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 ANO3Q9BYT9 981 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 SCOCQ9UIL1 159 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
ZNF558-201ENST00000301475 CDR2Q01850 454 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms