RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CCDC50Q8IVM0 306 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 TAS1R2Q8TE23 839 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 RIT2Q99578 217 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 PABPC3Q9H361 631 aaKnown RBP14.38□□□□□ -0.11
CTDP1-202ENST00000299543 MFAP3P55082 362 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 RWDD2BP57060 319 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 SPP2Q13103 211 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 AGBL2Q5U5Z8 902 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 YTHDF3Q7Z739 585 aaKnown RBP14.38□□□□□ -0.11
CTDP1-202ENST00000299543 SYT11Q9BT88 431 aa14.38□□□□□ -0.11
CTDP1-202ENST00000299543 RARAP10276 462 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CNGA1P29973 690 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CAP2P40123 477 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 TUBP50607 506 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 PDE6CP51160 858 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 FAM160B2Q86V87 743 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CPA5Q8WXQ8 436 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ANAPC7Q9UJX3 599 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 FEM1BQ9UK73 627 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 USTQ9Y2C2 406 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CD2APQ9Y5K6 639 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 FAM187AA6NFU0 413 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 MIF4GDA9UHW6 222 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 PPFIA2O75334 1257 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 SMNDC1O75940 238 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 PECAM1P16284 738 aaPredicted RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CHRNB2P17787 502 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CHRNA3P32297 505 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ABL2P42684 1182 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 RANBP1P43487 201 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 RPS6P62753 249 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 MRPS9P82933 396 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 C1orf220Q5T0J3 134 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 EIF1ADQ8N9N8 165 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ITFG2Q969R8 447 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 RMDN3Q96TC7 470 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 TAOK3Q9H2K8 898 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ZDHHC18Q9NUE0 388 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 INTS9Q9NV88 658 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 KCND2Q9NZV8 630 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 DIS3Q9Y2L1 958 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 C15orf41Q9Y2V0 281 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ATXN2Q99700 1313 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 HNRNPDLO14979 420 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 SMIM24O75264 130 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 LONRF1Q17RB8 773 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 SGO2Q562F6 1265 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 RNF207Q6ZRF8 634 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 SPATS2Q86XZ4 545 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 CEP170P1Q96L14 293 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 XPO6Q96QU8 1125 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 PRMT1Q99873 361 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
CTDP1-202ENST00000299543 FAM213AQ9BRX8 229 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 KMT5AQ9NQR1 393 aa14.37□□□□□ -0.11
CTDP1-202ENST00000299543 SCN9AQ15858 1988 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 CYP11B1P15538 503 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 PPP2R5EQ16537 467 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 RSBN1LQ6PCB5 846 aaPredicted RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 PWWP2AQ96N64 755 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 AGO4Q9HCK5 861 aaKnown RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 TBK1Q9UHD2 729 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 RASGRF2O14827 1237 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 MGRN1O60291 552 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 HARSP12081 509 aaKnown RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 MAPK4P31152 587 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 EIF3BP55884 814 aaKnown RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 KRT39Q6A163 491 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 SLC13A5Q86YT5 568 aaPredicted RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 SLC9A9Q8IVB4 645 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 KIF2BQ8N4N8 673 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 MAB21L3Q8N8X9 362 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 DDX23Q9BUQ8 820 aaKnown RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 TTC7AQ9ULT0 858 aaPredicted RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 UBE4BO95155 1302 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 UBR3Q6ZT12 1888 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 COILP38432 576 aaPredicted RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 FMO1Q01740 532 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 DMP1Q13316 513 aaPredicted RBP14.36□□□□□ -0.11
CTDP1-202ENST00000299543 CYFIP1Q7L576 1253 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 CHMP6Q96FZ7 201 aa14.36□□□□□ -0.11
CTDP1-202ENST00000299543 SPDYE5A6NIY4 337 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 DHX15O43143 795 aaKnown RBP14.35□□□□□ -0.11
CTDP1-202ENST00000299543 NPM3O75607 178 aaKnown RBP14.35□□□□□ -0.11
CTDP1-202ENST00000299543 GNAT1P11488 350 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 TNNI1P19237 187 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 ADSSP30520 456 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 KCNJ2P63252 427 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 NFIL3Q16649 462 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 GRHL1Q9NZI5 618 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 ECEL1O95672 775 aa14.35□□□□□ -0.11
CTDP1-202ENST00000299543 ICAM1P05362 532 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms