RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 LVRNQ6Q4G3 990 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 USP17L1Q7RTZ2 530 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 CMTM5Q96DZ9 223 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 MTERF3Q96E29 417 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 CCDC17Q96LX7 622 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 SCN3BQ9NY72 215 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 USE1Q9NZ43 259 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 HSPBP1Q9NZL4 362 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 TRIM10Q9UDY6 481 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 V9GYQ6 96 aa15.65■□□□□ 0.1
SCN3B-201ENST00000299333 SKAP2O75563 359 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 RASSF9O75901 435 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 IMPDH2P12268 514 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 SLFN12LQ6IEE8 588 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 GPR141Q7Z602 305 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 ATL2Q8NHH9 583 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 NMD3Q96D46 503 aaKnown RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 RBM15Q96T37 977 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 CHP1Q99653 195 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 ZCWPW1Q9H0M4 648 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 RBM12Q9NTZ6 932 aaKnown RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 NSMCE4AQ9NXX6 385 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 DCDC2Q9UHG0 476 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 PCDHGB4Q9UN71 923 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 LOC100653049A0A140TA62 436 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 KRT34O76011 436 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 KLHL2O95198 593 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 SSTR3P32745 418 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 LRRC31Q6UY01 552 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 KRT73Q86Y46 540 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 CDKL3Q8IVW4 592 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 TRIM63Q969Q1 353 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 OTUB1Q96FW1 271 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 DDX56Q9NY93 547 aaKnown RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
SCN3B-201ENST00000299333 GMEB1Q9Y692 573 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 SDC4P31431 198 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 WLSQ5T9L3 541 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 KLHL11Q9NVR0 708 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 PSAPP07602 524 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 SNAP25P60880 206 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 IYDQ6PHW0 289 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 MDM1Q8TC05 714 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 OXER1Q8TDS5 423 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 WDR17Q8IZU2 1322 aa15.64■□□□□ 0.09
SCN3B-201ENST00000299333 ALDH1B1P30837 517 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 SH3BP5LQ7L8J4 393 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 NLRP4Q96MN2 994 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 PCMTD2Q9NV79 361 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 PSMC3IPQ9P2W1 217 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 GNA15P30679 374 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 SYDE2Q5VT97 1194 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 DTNAQ9Y4J8 743 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 LSM1O15116 133 aaKnown RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 USP17L8P0C7I0 530 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF699Q32M78 642 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF804BA4D1E1 1349 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 A0A1W2PQC6 194 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 M0QYV0 167 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 BMP3P12645 472 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 SLC9A1P19634 815 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 AKR1D1P51857 326 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 PROSER3Q2NL68 480 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 KLF6Q99612 283 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 FAM213AQ9BRX8 229 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF556Q9HAH1 456 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 ZSCAN32Q9NX65 697 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 KDM5CP41229 1560 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 LDHAP00338 332 aaKnown RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 CDC27P30260 824 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 SESN2P58004 480 aaPredicted RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 DSTYKQ6XUX3 929 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 VPS50Q96JG6 964 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 KDM4CQ9H3R0 1056 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 IL1RL2Q9HB29 575 aa15.63■□□□□ 0.09
SCN3B-201ENST00000299333 PAPOLBQ9NRJ5 636 aaKnown RBP15.63■□□□□ 0.09
SCN3B-201ENST00000299333 PHF2O75151 1096 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 KNOP1Q1ED39 458 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 AARS2Q5JTZ9 985 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 PDXDC2PQ6P474 469 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 TMEM165Q9HC07 324 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 RGS5O15539 181 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 CSPG5O95196 566 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 FKBP9O95302 570 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 VAMP7P51809 220 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 FKBP9P1Q75LS8 142 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 SIRT2Q8IXJ6 389 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 AHI1Q8N157 1196 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 NDUFAF2Q8N183 169 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 CNDP1Q96KN2 507 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 NDFIP2Q9NV92 336 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 RAD51CO43502 376 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 MYBL1P10243 752 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 NQO1P15559 274 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 KCTD2Q14681 263 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 SLC27A3Q5K4L6 730 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 ATAD3BQ5T9A4 648 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms