RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 GOLGA8IPA6NC78 632 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 GOLGA8JA6NMD2 632 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 ANKRD63C9JTQ0 380 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TLR3O15455 904 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TSPAN1O60635 241 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 AP1G2O75843 785 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 SMC2O95347 1197 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 DARSP14868 501 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 GAP43P17677 238 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 AMPD1P23109 780 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 PRCPP42785 496 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 NAMPTP43490 491 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 PHKA2P46019 1235 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 SARSP49591 514 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 GATMP50440 423 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 PTENP60484 403 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 PTPN11Q06124 597 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 HSP90AA4PQ58FG1 418 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 FBXO47Q5MNV8 452 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TAF2Q6P1X5 1199 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 CNNM4Q6P4Q7 775 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 LINC00114Q6XXX2 140 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 ANKRD33Q7Z3H0 272 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 HAUS6Q7Z4H7 955 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TMCO2Q7Z6W1 182 aaPredicted RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 CEP120Q8N960 986 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 RETREG2Q8NC44 543 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 NOC3LQ8WTT2 800 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 SCFD1Q8WVM8 642 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TCP11Q8WWU5 503 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 KIFAP3Q92845 792 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 EEF2KMTQ96G04 330 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 IFT74Q96LB3 600 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 FUCA2Q9BTY2 467 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 EIF2AQ9BY44 585 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 CELF4Q9BZC1 486 aaKnown RBP7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 CXCL16Q9H2A7 254 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TMX1Q9H3N1 280 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 ERVK-5Q9HDB9 667 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 TMEM39AQ9NV64 488 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 ANKFY1Q9P2R3 1169 aa7.13□□□□□ -1.27
DEPDC4-201ENST00000299185 KAT6AQ92794 2004 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 MEIS3P2A8K0S8 358 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 ABLIM1O14639 778 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CLIC2O15247 247 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 MEFVO15553 781 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 RHOBTB3O94955 611 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 NPTXRO95502 500 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 ADRB2P07550 413 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 GNAT1P11488 350 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CSF2RAP15509 400 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 SELPP16109 830 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 TMOD1P28289 359 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CYP2J2P51589 502 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 NLRP12P59046 1061 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 AMPD3Q01432 767 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CLN3Q13286 438 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 TFDP1Q14186 410 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 TMEM132AQ24JP5 1023 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 ANO6Q4KMQ2 910 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 EPM2AIP1Q7L775 607 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CATSPER4Q7RTX7 472 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CD163Q86VB7 1156 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 ZBTB8OSQ8IWT0 167 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 TMEM192Q8IY95 271 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 RNF214Q8ND24 703 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 SPATA20Q8TB22 786 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 NELFBQ8WX92 580 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 BADQ92934 168 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 LPPQ93052 612 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 SAAL1Q96ER3 474 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 BICD1Q96G01 975 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 JPH2Q9BR39 696 aaPredicted RBP7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 CBWD1Q9BRT8 395 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 APOL6Q9BWW8 343 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 STRA6Q9BX79 667 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 SEMA6BQ9H3T3 888 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 PDZD7Q9H5P4 517 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 PIN4Q9Y237 131 aaKnown RBP7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 PPME1Q9Y570 386 aa7.12□□□□□ -1.27
DEPDC4-201ENST00000299185 MROH7Q68CQ1 1323 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 CNTNAP2Q9UHC6 1331 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 SZT2Q5T011 3432 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 PVALEFA0A1B0GWK0 134 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 M0QZ92 97 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 KIAA0355O15063 1070 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 TGFB1I1O43294 461 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 GAS2O43903 313 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 ARF4P18085 180 aaPredicted RBP7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 TNFSF9P41273 254 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 DNM2P50570 870 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 OSTNP61366 133 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 RBL2Q08999 1139 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 PAK2Q13177 524 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 KCNB1Q14721 858 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 LBRQ14739 615 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
DEPDC4-201ENST00000299185 STX1AQ16623 288 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms