RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SCNN1DP51172 638 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 RNF43Q68DV7 783 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
TRUB1-201ENST00000298746 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.47
TRUB1-201ENST00000298746 AHCYL1O43865 530 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 PIAS1O75925 651 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 ZCCHC18P0CG32 403 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 TPBGLP0DKB5 382 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 PPP4CP60510 307 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 MGAT5Q09328 741 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 SNX30Q5VWJ9 437 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CCDC174Q6PII3 467 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CCDC125Q86Z20 511 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 SYT15Q9BQS2 421 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 TMEM109Q9BVC6 243 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
TRUB1-201ENST00000298746 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 GNPATO15228 680 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 GAS7O60861 476 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 PEX11AO75192 247 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 STAT4Q14765 748 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 C6orf163Q5TEZ5 329 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 DAB2IPQ5VWQ8 1189 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 SLFN13Q68D06 897 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 C11orf63Q6NUN7 778 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CLEC4GQ6UXB4 293 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 NLRP9Q7RTR0 991 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 ARHGEF19Q8IW93 802 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CCDC89Q8N998 374 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CFAP61Q8NHU2 1237 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 HAUS1Q96CS2 278 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CFAP57Q96MR6 1250 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 DENND2DQ9H6A0 471 aaPredicted RBP12.14□□□□□ -0.47
TRUB1-201ENST00000298746 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 KLHL11Q9NVR0 708 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 WHRNQ9P202 907 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CHKBQ9Y259 395 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 GLI3P10071 1580 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 KCNQ2O43526 872 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 EYA4O95677 639 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 ZBTB48P10074 688 aaPredicted RBP12.14□□□□□ -0.47
TRUB1-201ENST00000298746 ESRRAP11474 423 aaPredicted RBP12.14□□□□□ -0.47
TRUB1-201ENST00000298746 MAGEA4P43358 317 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 CPA2P48052 419 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 PPP1R18Q6NYC8 613 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 SLC47A2Q86VL8 602 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 UCMAQ8WVF2 138 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 SPIRE2Q8WWL2 714 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 NUP98P52948 1817 aa12.14□□□□□ -0.47
TRUB1-201ENST00000298746 TISP43B9A030 160 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 MAP3K7O43318 606 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 ATP9AO75110 1047 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 HAUS5O94927 633 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
TRUB1-201ENST00000298746 VHLP40337 213 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 DLG4P78352 724 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 P3H1Q32P28 736 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 ATL2Q8NHH9 583 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 MAIP1Q8WWC4 291 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 KIFAP3Q92845 792 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 LIN7AO14910 233 aaPredicted RBP12.13□□□□□ -0.47
TRUB1-201ENST00000298746 CALCAP01258 141 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 TUBP50607 506 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 VAMP7P51809 220 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 CFAP157Q5JU67 520 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 HYIQ5T013 277 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 LVRNQ6Q4G3 990 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
TRUB1-201ENST00000298746 DDX50Q9BQ39 737 aaKnown RBP12.13□□□□□ -0.47
TRUB1-201ENST00000298746 AMNQ9BXJ7 453 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 IKBKGQ9Y6K9 419 aa12.13□□□□□ -0.47
TRUB1-201ENST00000298746 EML1O00423 815 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 MAN1A1P33908 653 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 LAMB3Q13751 1172 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 PKN2Q16513 984 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 ASRGL1Q7L266 308 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 ANKMY2Q8IV38 441 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 ZBED8Q8IZ13 594 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 SCG3Q8WXD2 468 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 UTP4Q969X6 686 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 TTC1Q99614 292 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 LRMDAQ9H2I8 198 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 G3BP2Q9UN86 482 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CCDC160A6NGH7 325 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 OAS1P00973 400 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 RALAP11233 206 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 CD58P19256 250 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 WDR4P57081 412 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
TRUB1-201ENST00000298746 TRAF1Q13077 416 aa12.12□□□□□ -0.47
TRUB1-201ENST00000298746 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms