RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CGRRF1Q99675 332 aa26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 AGO3Q9H9G7 860 aaKnown RBP26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 PIN4Q9Y237 131 aaKnown RBP26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 LUC7L2Q9Y383 392 aaKnown RBP26.69■■□□□ 1.86
GTF2A1-201ENST00000298173 COL6A1P12109 1028 aa26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 ACTN1P12814 892 aa26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 KRT9P35527 623 aa26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 KLHDC7AQ5VTJ3 777 aa26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 EIF2AQ9BY44 585 aaKnown RBP26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 RPF1Q9H9Y2 349 aaKnown RBP26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 FBXL5Q9UKA1 691 aa26.68■■□□□ 1.86
GTF2A1-201ENST00000298173 RBAK-RBAKDNI3L0D1 243 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 NPTXRO95502 500 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 TNNI1P19237 187 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 ZBED6P86452 979 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 CETN1Q12798 172 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 SLC10A6Q3KNW5 377 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 ZACNQ401N2 412 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 CHST12Q9NRB3 414 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 CEP72Q9P209 647 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 CITO14578 2027 aa26.67■■□□□ 1.86
GTF2A1-201ENST00000298173 GPR182O15218 404 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 CXCL8P10145 99 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 CCZ1BP86790 482 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 CCZ1P86791 482 aaPredicted RBP26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 LPIN1Q14693 890 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 SLC39A5Q6ZMH5 540 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 TMEM139Q8IV31 216 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 WDR49Q8IV35 697 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 BAP1Q92560 729 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 DNAJC7Q99615 494 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 ERVK-5Q9HDB9 667 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 ABHD10Q9NUJ1 306 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 LRRN2O75325 713 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 IL18RAPO95256 599 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 FECHP22830 423 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 AP3M2P53677 418 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 C1orf53Q5VUE5 145 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 LMBRD2Q68DH5 695 aaPredicted RBP26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 ANKLE1Q8NAG6 615 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 USP38Q8NB14 1042 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 OR8K1Q8NGG5 319 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 CAGE1Q8TC20 777 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 ACAP3Q96P50 834 aa26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 INTS2Q9H0H0 1204 aaKnown RBP26.66■■□□□ 1.86
GTF2A1-201ENST00000298173 MROH7Q68CQ1 1323 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 UCHL3P15374 230 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 ANKRD33Q7Z3H0 272 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 FBXL13Q8NEE6 735 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 OR5B17Q8NGF7 314 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 TAS1R2Q8TE23 839 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 SEMA4DQ92854 862 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 FAM84AQ96KN4 292 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 NAA15Q9BXJ9 866 aaKnown RBP26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 ASB7Q9H672 318 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 PADI3Q9ULW8 664 aa26.65■■□□□ 1.86
GTF2A1-201ENST00000298173 TRIP11Q15643 1979 aa26.64■■□□□ 1.86
GTF2A1-201ENST00000298173 LACTBL1A8MY62 500 aa26.64■■□□□ 1.86
GTF2A1-201ENST00000298173 POLR2FP61218 127 aaKnown RBP26.64■■□□□ 1.86
GTF2A1-201ENST00000298173 NFX1Q12986 1120 aaKnown RBP26.64■■□□□ 1.86
GTF2A1-201ENST00000298173 TDRD10Q5VZ19 366 aaKnown RBP26.64■■□□□ 1.86
GTF2A1-201ENST00000298173 EFCAB13Q8IY85 973 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 ZNF397Q8NF99 534 aaPredicted RBP26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 FAM212AQ96EL1 285 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 CCDC94Q9BW85 323 aaPredicted RBP26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 RAB20Q9NX57 234 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 SNTG2Q9NY99 539 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 GHRP10912 638 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 CD52P31358 61 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 HNRNPH3P31942 346 aaKnown RBP26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 MBTPS1Q14703 1052 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 DUOXA2Q1HG44 320 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 PHLDB3Q6NSJ2 640 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 CCDC112Q8NEF3 446 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 TOX2Q96NM4 488 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 PLEKHA5Q9HAU0 1116 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 ZKSCAN5Q9Y2L8 839 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 DAAM1Q9Y4D1 1078 aa26.63■■□□□ 1.85
GTF2A1-201ENST00000298173 TULP1O00294 542 aaPredicted RBP26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 VNN1O95497 513 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 SKILP12757 684 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 CAPN2P17655 700 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 ALKAL1Q6UXT8 129 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 CD302Q8IX05 232 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 SMG8Q8ND04 991 aaKnown RBP26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 DIS3LQ8TF46 1054 aaKnown RBP26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 BAG1Q99933 345 aaPredicted RBP26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 NLRC4Q9NPP4 1024 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 PRDM10Q9NQV6 1147 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 APEX2Q9UBZ4 518 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 PLAGL2Q9UPG8 496 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 HES2Q9Y543 173 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 FHOD1Q9Y613 1164 aa26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 KIAA0100Q14667 2235 aaKnown RBP26.62■■□□□ 1.85
GTF2A1-201ENST00000298173 ATN1P54259 1190 aaPredicted RBP26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 DSC3Q14574 896 aa26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 WDR59Q6PJI9 974 aa26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 CACNA2D4Q7Z3S7 1137 aa26.61■■□□□ 1.85
GTF2A1-201ENST00000298173 TRAIPQ9BWF2 469 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms