RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 DIS3L2Q8IYB7 885 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 SP7Q8TDD2 431 aaPredicted RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 DLG3Q92796 817 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 HAUS1Q96CS2 278 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 FGD4Q96M96 766 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 CCDC43Q96MW1 224 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 HNRNPABQ99729 332 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 BTBD2Q9BX70 525 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 EPS8L2Q9H6S3 715 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 AVENQ9NQS1 362 aaPredicted RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 ATXN10Q9UBB4 475 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 FAM198AQ9UFP1 575 aa3.31□□□□□ -1.88
CREBRF-201ENST00000296953 PDS5AQ29RF7 1337 aaKnown RBP3.31□□□□□ -1.88
CREBRF-201ENST00000296953 GOLGA8AA7E2F4 631 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 AP3B1O00203 1094 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ACADMP11310 421 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CD96P40200 585 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 COPB1P53618 953 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 IKQ13123 557 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ZMYM1Q5SVZ6 1142 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 METTL21CQ5VZV1 264 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 KRT79Q5XKE5 535 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 KAZNQ674X7 775 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ARHGEF19Q8IW93 802 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 FAM81AQ8TBF8 368 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ZNF317Q96PQ6 595 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CAAP1Q9H8G2 361 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 INIPQ9NRY2 104 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 TBC1D23Q9NUY8 699 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 KNTC1P50748 2209 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 STRCP1A6NGW2 1772 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RFPL4AA6NLU0 287 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RFPL4AL1F8VTS6 287 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NDUFS2O75306 463 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NEBLO76041 1014 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ALOX5P09917 674 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 SLC11A2P49281 568 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ACBD5Q5T8D3 534 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ISCA2Q86U28 154 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ATP2A3Q93084 1043 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CCDC127Q96BQ5 260 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 DHX58Q96C10 678 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CDCA5Q96FF9 252 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 DDX27Q96GQ7 796 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CRELD1Q96HD1 420 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CCDC8Q9H0W5 538 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RNPEPL1Q9HAU8 725 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 MRM3Q9HC36 420 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 IL1RAPL2Q9NP60 686 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 TUBGCP4Q9UGJ1 667 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CCPG1Q9ULG6 757 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 SPG7Q9UQ90 795 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 GNEQ9Y223 722 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ZNFX1Q9P2E3 1918 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 TNRQ92752 1358 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 HGSO14964 777 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 POMCP01189 267 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NTRK1P04629 796 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 VCAM1P19320 739 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 MARCKSP29966 332 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RPL5P46777 297 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RBM5P52756 815 aaKnown RBP eCLIP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 PRKAA2P54646 552 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 SLC7A9P82251 487 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 MXRA7P84157 204 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 GRIN1Q05586 938 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 AP1B1Q10567 949 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ACVR2BQ13705 512 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 HERC4Q5GLZ8 1057 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 PPP1R18Q6NYC8 613 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CHCHD4Q8N4Q1 142 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 SLC30A5Q8TAD4 765 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ACTRT1Q8TDG2 376 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 AENQ8WTP8 325 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 DENND2DQ9H6A0 471 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 EHMT1Q9H9B1 1298 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 MAGEE1Q9HCI5 957 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 PTTG2Q9NZH5 202 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 UVRAGQ9P2Y5 699 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 SLC24A2Q9UI40 661 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 PACSIN2Q9UNF0 486 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 CACNA1BQ00975 2339 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 PITPNM2Q9BZ72 1349 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 LOC105371267A0A1B0GV96 52 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 LCA5LO95447 670 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ABHD2P08910 425 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 GZMAP12544 262 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 GNAZP19086 355 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 ATP6V1C1P21283 382 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 HOXC13P31276 330 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NUMBP49757 651 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 LRMPQ12912 555 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 FBXO43Q4G163 708 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 RBM20Q5T481 1227 aaKnown RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NAA35Q5VZE5 725 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 BCL7BQ9BQE9 202 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 JPH2Q9BR39 696 aaPredicted RBP3.3□□□□□ -1.88
CREBRF-201ENST00000296953 WWP1Q9H0M0 922 aa3.3□□□□□ -1.88
CREBRF-201ENST00000296953 NAPBQ9H115 298 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms