RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 LRIG3Q6UXM1 1119 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 EMSYQ7Z589 1322 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 CYP26A1O43174 497 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 HUS1O60921 280 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 TOM1L1O75674 476 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 EPHB1P54762 984 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 RNF149Q8NC42 400 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 ANAPC4Q9UJX5 808 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 ARL2BPQ9Y2Y0 163 aa14.26□□□□□ -0.13
HPS3-201ENST00000296051 AGLP35573 1532 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 YY1P25490 414 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
HPS3-201ENST00000296051 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 MTRQ99707 1265 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 REEP2Q9BRK0 252 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 JPH1Q9HDC5 661 aaPredicted RBP14.25□□□□□ -0.13
HPS3-201ENST00000296051 DIP2AQ14689 1571 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 FAM187AA6NFU0 413 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 SFNP31947 248 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 CDR2Q01850 454 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 ZNF543Q08ER8 600 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 PLCB4Q15147 1175 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 THEM5Q8N1Q8 247 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 KIAA0895Q8NCT3 520 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 GLIS3Q8NEA6 775 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 DPF3Q92784 378 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 ZBTB10Q96DT7 871 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 FAM161BQ96MY7 647 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 FAM213AQ9BRX8 229 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 LXNQ9BS40 222 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 CPA4Q9UI42 421 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 SLC4A7Q9Y6M7 1214 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 PSMC5P62195 406 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 DNAJC3Q13217 504 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 ZBED8Q8IZ13 594 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 C18orf8Q96DM3 657 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 ZWILCHQ9H900 591 aa14.25□□□□□ -0.13
HPS3-201ENST00000296051 PIN4Q9Y237 131 aaKnown RBP14.25□□□□□ -0.13
HPS3-201ENST00000296051 DCTN3O75935 186 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 UBOX5O94941 541 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 GRB10Q13322 594 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 SURF1Q15526 300 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.24□□□□□ -0.13
HPS3-201ENST00000296051 LMBRD2Q68DH5 695 aaPredicted RBP14.24□□□□□ -0.13
HPS3-201ENST00000296051 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 ANKMY2Q8IV38 441 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 PARD3BQ8TEW8 1205 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 CCDC68Q9H2F9 335 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 STOML1Q9UBI4 398 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 AGTP01019 485 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 CASP4P49662 377 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 PDE1BQ01064 536 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 AMPD2Q01433 879 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 C2CD6Q53TS8 623 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 AGBL2Q5U5Z8 902 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 TPCN2Q8NHX9 752 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
HPS3-201ENST00000296051 CCDC195A0A1B0GUA6 201 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 LRRC10BA6NIK2 292 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 OPLAHO14841 1288 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 GTF2A2P52657 109 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 FCGRTP55899 365 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 BTBD6Q96KE9 485 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 TRIM55Q9BYV6 548 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 SEMA4AQ9H3S1 761 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
HPS3-201ENST00000296051 ADAM22Q9P0K1 906 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 CPB1P15086 417 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 TPD52P55327 224 aaPredicted RBP14.24□□□□□ -0.13
HPS3-201ENST00000296051 GPS1Q13098 491 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 IZUMO3Q5VZ72 239 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 PPP4R1Q8TF05 950 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 ATP2A3Q93084 1043 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 CFAP36Q96G28 342 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 AGBL1Q96MI9 1066 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
HPS3-201ENST00000296051 PXDNQ92626 1479 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 CFLARO15519 480 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 COMTP21964 271 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 KCNA4P22459 653 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 ABCD1P33897 745 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 TMPRSS15P98073 1019 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 CENPPQ6IPU0 288 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 ACER1Q8TDN7 264 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 PPP2R3CQ969Q6 453 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 NPHS2Q9NP85 383 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 HAUS5O94927 633 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 LDHAP00338 332 aaKnown RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 NCF2P19878 526 aaPredicted RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 DHX34Q14147 1143 aaKnown RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 ZNF571Q7Z3V5 609 aaPredicted RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 NOP9Q86U38 636 aaKnown RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 FBXL16Q8N461 479 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 DDX27Q96GQ7 796 aaKnown RBP14.23□□□□□ -0.13
HPS3-201ENST00000296051 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
HPS3-201ENST00000296051 RGL2O15211 777 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms