RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TUT1Q9H6E5 874 aaKnown RBP9.87□□□□□ -0.83
PDPN-201ENST00000294489 SEPT11Q9NVA2 429 aaKnown RBP9.87□□□□□ -0.83
PDPN-201ENST00000294489 AGO2Q9UKV8 859 aaKnown RBP9.87□□□□□ -0.83
PDPN-201ENST00000294489 HAS3O00219 553 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 NCK2O43639 380 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDPN-201ENST00000294489 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
PDPN-201ENST00000294489 CBX1P83916 185 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 ARHGEF19Q8IW93 802 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 KRT222Q8N1A0 295 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 PPM1KQ8N3J5 372 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 COG1Q8WTW3 980 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 PNKPQ96T60 521 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 PSMB7Q99436 277 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 TARS2Q9BW92 718 aaKnown RBP9.87□□□□□ -0.83
PDPN-201ENST00000294489 IFT122Q9HBG6 1241 aa9.87□□□□□ -0.83
PDPN-201ENST00000294489 KAT6AQ92794 2004 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 GRID2IPA4D2P6 1211 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 TTLL13PA6NNM8 815 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ACKR2O00590 384 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 TOM1L1O75674 476 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 FTCDO95954 541 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 F2P00734 622 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZNF286BP0CG31 522 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 CXCR5P32302 372 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 USP8P40818 1118 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 NLRP11P59045 1033 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 POU5F1Q01860 360 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 CFAP221Q4G0U5 840 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 MEI1Q5TIA1 1274 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZNF572Q7Z3I7 529 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZBTB8OSQ8IWT0 167 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 REM2Q8IYK8 340 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 LNX1Q8TBB1 728 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 CTNNBL1Q8WYA6 563 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 TAF4BQ92750 862 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 SEMA4DQ92854 862 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 NT5C1BQ96P26 610 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 FNBP1Q96RU3 617 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZIC5Q96T25 663 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 RAB20Q9NX57 234 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 PDE2AO00408 941 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 SEC31AO94979 1220 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 C4BPAP04003 597 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 HOXC8P31273 242 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 GALCP54803 685 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 WNT7BP56706 349 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ADAM17P78536 824 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 CCL14Q16627 93 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 AMHR2Q16671 573 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 WDR93Q6P2C0 686 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 SYCE1Q8N0S2 351 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 KAT2BQ92831 832 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZBTB45Q96K62 511 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 POP1Q99575 1024 aaKnown RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 AGPAT1Q99943 283 aa9.86□□□□□ -0.83
PDPN-201ENST00000294489 ZHX1Q9UKY1 873 aaPredicted RBP9.86□□□□□ -0.83
PDPN-201ENST00000294489 MBLAC1A4D2B0 266 aaPredicted RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 RRN3P2A6NIE6 340 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 PRKCBP05771 671 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 TMEM253P0C7T8 217 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 MATR3P43243 847 aaKnown RBP eCLIP9.85□□□□□ -0.83
PDPN-201ENST00000294489 RPS6KA1Q15418 735 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 LONRF2Q1L5Z9 754 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 RNF149Q8NC42 400 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 SPATA4Q8NEY3 305 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 SUGCTQ9HAC7 445 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 PDCD11Q14690 1871 aaKnown RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 TMCO5BA8MYB1 307 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 CLCN3P51790 818 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 GRIK4Q16099 956 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 MAPK6Q16659 721 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 ZACNQ401N2 412 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 PRAMEF19Q5SWL8 479 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 MMGT1Q8N4V1 131 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 TAS1R2Q8TE23 839 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 CGRRF1Q99675 332 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 RNF216Q9NWF9 866 aaPredicted RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 CPSF3Q9UKF6 684 aaKnown RBP9.85□□□□□ -0.83
PDPN-201ENST00000294489 TNFSF13BQ9Y275 285 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 ANKRD62A6NC57 917 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 IQCF3P0C7M6 154 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 TNNI1P19237 187 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 VSNL1P62760 191 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 C2orf54Q08AI8 447 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 MAP9Q49MG5 647 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 ENOSF1Q7L5Y1 443 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 DNAAF5Q86Y56 855 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 RHPN2Q8IUC4 686 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 BRSK2Q8IWQ3 736 aa9.85□□□□□ -0.83
PDPN-201ENST00000294489 FAM71AQ8IYT1 594 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms