RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 FAM105AQ9NUU6 356 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 SNTG2Q9NY99 539 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 IPPQ9Y573 584 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 PCDHB2Q9Y5E7 798 aa19.31■□□□□ 0.68
CCDC78-201ENST00000293889 TULP1O00294 542 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 MEFVO15553 781 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 ACRP10323 421 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 RFC2P35250 354 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 VAMP7P51809 220 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 MCCD1P59942 119 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 DLG4P78352 724 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 PSMD6Q15008 389 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 MAN2A1Q16706 1144 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 MIIPQ5JXC2 388 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 BRSK2Q8IWQ3 736 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 LINC01599Q8WXQ3 324 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 CCDC127Q96BQ5 260 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 ZNF830Q96NB3 372 aaPredicted RBP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 ACAP3Q96P50 834 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 TRAIPQ9BWF2 469 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 RPF1Q9H9Y2 349 aaKnown RBP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 PDE11AQ9HCR9 933 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
CCDC78-201ENST00000293889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.3■□□□□ 0.68
CCDC78-201ENST00000293889 TRIM49P0CI25 452 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 TRIM49CP0CI26 452 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 CXCL8P10145 99 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 UBASH3AP57075 661 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
CCDC78-201ENST00000293889 C1orf220Q5T0J3 134 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 TCERG1LQ5VWI1 586 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 TMC2Q8TDI7 906 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 PARD3BQ8TEW8 1205 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 UBE2Q2Q8WVN8 375 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 APBB2Q92870 758 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 SLC35C1Q96A29 364 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 CCDC94Q9BW85 323 aaPredicted RBP19.29■□□□□ 0.68
CCDC78-201ENST00000293889 APOL6Q9BWW8 343 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 FTHL17Q9BXU8 183 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 RNF39Q9H2S5 420 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 IL23AQ9NPF7 189 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 RGS18Q9NS28 235 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 SLC10A6Q3KNW5 377 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 VWA3BQ502W6 1294 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 PRPF38BQ5VTL8 546 aaKnown RBP19.29■□□□□ 0.68
CCDC78-201ENST00000293889 FAM212AQ96EL1 285 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
CCDC78-201ENST00000293889 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
CCDC78-201ENST00000293889 PRO3102Q9H379 93 aa19.29■□□□□ 0.68
CCDC78-201ENST00000293889 A0A0U1RQF3 1178 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 A0A1B0GTH6 734 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 LRRIQ3A6PVS8 624 aaPredicted RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 DLATP10515 647 aaKnown RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 AKAP5P24588 427 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 RAB27AP51159 221 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 POU5F1Q01860 360 aaKnown RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 KCNH2Q12809 1159 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 CHRDL2Q6WN34 429 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 MRPL10Q7Z7H8 261 aaKnown RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 TRIM5Q9C035 493 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 UBE2OQ9C0C9 1292 aaKnown RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 XPO4Q9C0E2 1151 aaKnown RBP19.28■□□□□ 0.68
CCDC78-201ENST00000293889 NDST4Q9H3R1 872 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 INTS13Q9NVM9 706 aa19.28■□□□□ 0.68
CCDC78-201ENST00000293889 MICAL3Q7RTP6 2002 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 LACTBL1A8MY62 500 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 C9IYK1 514 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 PES1O00541 588 aaKnown RBP19.27■□□□□ 0.68
CCDC78-201ENST00000293889 ENPP3O14638 875 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 ZNF623O75123 536 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 RECQL4O94761 1208 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 PPP2R3AQ06190 1150 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 ENPEPQ07075 957 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 NR1I3Q14994 352 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 FILIP1LQ4L180 1135 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 TMEM240Q5SV17 173 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 FAM43BQ6ZT52 329 aaPredicted RBP19.27■□□□□ 0.68
CCDC78-201ENST00000293889 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.68
CCDC78-201ENST00000293889 PARP2Q9UGN5 583 aa19.27■□□□□ 0.68
CCDC78-201ENST00000293889 TTC26A0AVF1 554 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 LGALS16A8MUM7 142 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 IL18RAPO95256 599 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 AFPP02771 609 aaKnown RBP19.26■□□□□ 0.67
CCDC78-201ENST00000293889 SKIP12755 728 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 ATF7P17544 494 aaPredicted RBP19.26■□□□□ 0.67
CCDC78-201ENST00000293889 IBSPP21815 317 aaPredicted RBP19.26■□□□□ 0.67
CCDC78-201ENST00000293889 BMP8BP34820 402 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 YARSP54577 528 aaKnown RBP19.26■□□□□ 0.67
CCDC78-201ENST00000293889 CLDN10P78369 228 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 FAM189BP81408 668 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 PPP3CAQ08209 521 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 C9orf50Q5SZB4 431 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 CNKSR3Q6P9H4 555 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 ZNF365Q70YC5 407 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 SLC24A5Q71RS6 500 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 USP37Q86T82 979 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 ECHDC2Q86YB7 292 aa19.26■□□□□ 0.67
CCDC78-201ENST00000293889 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
CCDC78-201ENST00000293889 LPPQ93052 612 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms