RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MAML1Q92585 1016 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 CHMP6Q96FZ7 201 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 BATF3Q9NR55 127 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 SEPT10Q9P0V9 454 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 MYO5AQ9Y4I1 1855 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 H0Y3Z8 333 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 CDC25AP30304 524 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 RNF180Q86T96 592 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 TRIM56Q9BRZ2 755 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 ABHD16BQ9H3Z7 469 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 SH3GLB2Q9NR46 395 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 STK36Q9NRP7 1315 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 MEFVO15553 781 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 SRGAP2O75044 1071 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 MOGSQ13724 837 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 XRRA1Q6P2D8 792 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 OSBPL9Q96SU4 736 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 TINF2Q9BSI4 451 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
SYNGAP1-201ENST00000293748 AKR1A1P14550 325 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 NOVP48745 357 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 Q3C1V9 767 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 RSPH3Q86UC2 560 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 AIFM3Q96NN9 605 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 LRRC37BQ96QE4 947 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 MMS19Q96T76 1030 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 ZNF214Q9UL59 606 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 WDR91A4D1P6 747 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 GNGT2O14610 69 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 INHAP05111 366 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PGK2P07205 417 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PLS3P13797 630 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 EEF1B2P24534 225 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 GRB14Q14449 540 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PLCB4Q15147 1175 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 UBE2TQ9NPD8 197 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 SMYD2Q9NRG4 433 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PPARGC1AQ9UBK2 798 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 RASA4BC9J798 803 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 RASA4O43374 803 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PPP1R37O75864 691 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 TTC25Q96NG3 672 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 CYTH2Q99418 400 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 MLXIPQ9HAP2 919 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 TAF6LQ9Y6J9 622 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 LRRIQ4A6NIV6 560 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 HAUS5O94927 633 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 EIF2AK2P19525 551 aaKnown RBP12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 ALCAMQ13740 583 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 UNC13DQ70J99 1090 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 ATP6V0A1Q93050 837 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 SLITRK6Q9H5Y7 841 aa12.59□□□□□ -0.39
SYNGAP1-201ENST00000293748 A0A0G2JND7 137 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 CLIC2O15247 247 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PLA2G4BP0C869 781 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PFKFB3Q16875 520 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 KIAA1755Q5JYT7 1200 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 OLFML2BQ68BL8 750 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 SCFD2Q8WU76 684 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 STAMBPL1Q96FJ0 436 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 A1CFQ9NQ94 594 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZFP69BQ9UJL9 534 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 RPTORQ8N122 1335 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 FAM187AA6NFU0 413 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 NKRFO15226 690 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 NCF2P19878 526 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 POLGP54098 1239 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 DARS2Q6PI48 645 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 FAM47EQ6ZV65 393 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 CEP70Q8NHQ1 597 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ETNK1Q9HBU6 452 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PSD3Q9NYI0 1048 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 CAPN15O75808 1086 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PYGBP11216 843 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 ELNP15502 786 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 PMS2P54278 862 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 NRBP2Q9NSY0 501 aa12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
SYNGAP1-201ENST00000293748 A0A1W2PQC6 194 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms